Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 AC010536.3-201ENST00000620306 533 ntBASIC19.37■□□□□ 0.69
HPF1Q9NWY4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 ID1-201ENST00000376105 1233 ntBASIC19.36■□□□□ 0.69
HPF1Q9NWY4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 RNF165-205ENST00000588679 2904 ntBASIC19.36■□□□□ 0.69
HPF1Q9NWY4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPF1Q9NWY4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 MIR663A-201ENST00000385250 93 ntBASIC19.35■□□□□ 0.69
HPF1Q9NWY4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPF1Q9NWY4 KRT16P2-201ENST00000414673 1423 ntBASIC19.34■□□□□ 0.69
HPF1Q9NWY4 CROCCP5-201ENST00000436658 830 ntBASIC19.34■□□□□ 0.69
HPF1Q9NWY4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.34■□□□□ 0.69
HPF1Q9NWY4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HPF1Q9NWY4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.34■□□□□ 0.69
HPF1Q9NWY4 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.34■□□□□ 0.69
HPF1Q9NWY4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.34■□□□□ 0.69
HPF1Q9NWY4 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.34■□□□□ 0.69
HPF1Q9NWY4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HPF1Q9NWY4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPF1Q9NWY4 ECEL1P1-201ENST00000373592 1742 ntBASIC19.34■□□□□ 0.69
HPF1Q9NWY4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.33■□□□□ 0.69
HPF1Q9NWY4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HPF1Q9NWY4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HPF1Q9NWY4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HPF1Q9NWY4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.33■□□□□ 0.69
HPF1Q9NWY4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HPF1Q9NWY4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HPF1Q9NWY4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HPF1Q9NWY4 AC061975.6-201ENST00000579045 1553 ntBASIC19.33■□□□□ 0.69
HPF1Q9NWY4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.33■□□□□ 0.68
HPF1Q9NWY4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.33■□□□□ 0.68
HPF1Q9NWY4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.33■□□□□ 0.68
HPF1Q9NWY4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.33■□□□□ 0.68
HPF1Q9NWY4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.33■□□□□ 0.68
HPF1Q9NWY4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.33■□□□□ 0.68
HPF1Q9NWY4 AC013268.1-206ENST00000638368 961 ntBASIC19.33■□□□□ 0.68
HPF1Q9NWY4 AC112229.1-201ENST00000639295 961 ntBASIC19.33■□□□□ 0.68
HPF1Q9NWY4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HPF1Q9NWY4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.33■□□□□ 0.68
HPF1Q9NWY4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HPF1Q9NWY4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HPF1Q9NWY4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HPF1Q9NWY4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 TERF1P5-201ENST00000477545 1207 ntBASIC19.32■□□□□ 0.68
HPF1Q9NWY4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 AC005181.1-201ENST00000604782 1256 ntBASIC19.32■□□□□ 0.68
HPF1Q9NWY4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPF1Q9NWY4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms