Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLN6Q9NWW5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLN6Q9NWW5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLN6Q9NWW5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLN6Q9NWW5 PLK5-205ENST00000642079 1969 ntBASIC19.03■□□□□ 0.64
CLN6Q9NWW5 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.03■□□□□ 0.64
CLN6Q9NWW5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.03■□□□□ 0.64
CLN6Q9NWW5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLN6Q9NWW5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLN6Q9NWW5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLN6Q9NWW5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLN6Q9NWW5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLN6Q9NWW5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 AP004607.7-201ENST00000527152 1677 ntBASIC19.02■□□□□ 0.64
CLN6Q9NWW5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLN6Q9NWW5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.02■□□□□ 0.63
CLN6Q9NWW5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.02■□□□□ 0.63
CLN6Q9NWW5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CLN6Q9NWW5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.02■□□□□ 0.63
CLN6Q9NWW5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLN6Q9NWW5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLN6Q9NWW5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CLN6Q9NWW5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CLN6Q9NWW5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLN6Q9NWW5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CLN6Q9NWW5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19■□□□□ 0.63
CLN6Q9NWW5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLN6Q9NWW5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CLN6Q9NWW5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19■□□□□ 0.63
CLN6Q9NWW5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19■□□□□ 0.63
CLN6Q9NWW5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19■□□□□ 0.63
CLN6Q9NWW5 AC099791.2-201ENST00000605725 427 ntBASIC19■□□□□ 0.63
CLN6Q9NWW5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19■□□□□ 0.63
CLN6Q9NWW5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLN6Q9NWW5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLN6Q9NWW5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLN6Q9NWW5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19■□□□□ 0.63
CLN6Q9NWW5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLN6Q9NWW5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLN6Q9NWW5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CLN6Q9NWW5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 AL391422.3-201ENST00000603791 2761 ntBASIC18.99■□□□□ 0.63
CLN6Q9NWW5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 OR2I1P-207ENST00000453522 948 ntBASIC18.99■□□□□ 0.63
CLN6Q9NWW5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLN6Q9NWW5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms