Protein–RNA interactions for Protein: Q9NV12

TMEM140, Transmembrane protein 140, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM140Q9NV12 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.91■□□□□ 0.3
TMEM140Q9NV12 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM140Q9NV12 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM140Q9NV12 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.91■□□□□ 0.3
TMEM140Q9NV12 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM140Q9NV12 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM140Q9NV12 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM140Q9NV12 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM140Q9NV12 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 LINC01006-201ENST00000333319 2292 ntBASIC16.9■□□□□ 0.3
TMEM140Q9NV12 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.9■□□□□ 0.3
TMEM140Q9NV12 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 AC105233.4-201ENST00000642045 216 ntBASIC16.9■□□□□ 0.3
TMEM140Q9NV12 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM140Q9NV12 AC055733.4-201ENST00000638462 1354 ntBASIC16.89■□□□□ 0.3
TMEM140Q9NV12 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
TMEM140Q9NV12 FEM1AP1-201ENST00000431297 1995 ntBASIC16.89■□□□□ 0.3
TMEM140Q9NV12 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 AC006128.1-201ENST00000624704 1661 ntBASIC16.89■□□□□ 0.29
TMEM140Q9NV12 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 AC099791.1-201ENST00000416440 715 ntBASIC16.89■□□□□ 0.29
TMEM140Q9NV12 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM140Q9NV12 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 AC027682.1-201ENST00000562846 899 ntBASIC16.88■□□□□ 0.29
TMEM140Q9NV12 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 TSPY26P-201ENST00000476365 1326 ntBASIC16.88■□□□□ 0.29
TMEM140Q9NV12 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 AC005224.4-201ENST00000583262 1652 ntBASIC16.88■□□□□ 0.29
TMEM140Q9NV12 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM140Q9NV12 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
TMEM140Q9NV12 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms