Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 HES6-204ENST00000409182 863 ntTSL 2 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SND1-IT1Q9HBX3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SND1-IT1Q9HBX3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SND1-IT1Q9HBX3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SND1-IT1Q9HBX3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SND1-IT1Q9HBX3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SND1-IT1Q9HBX3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SND1-IT1Q9HBX3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.95□□□□□ -0.18
SND1-IT1Q9HBX3 AL391422.3-201ENST00000603791 2761 ntBASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SND1-IT1Q9HBX3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 PCDHAC2-203ENST00000615316 3011 ntBASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 AC010997.5-201ENST00000609182 354 ntBASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.93□□□□□ -0.18
SND1-IT1Q9HBX3 AP005212.1-201ENST00000581547 1997 ntBASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 AC241377.3-202ENST00000626088 1088 ntBASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 AC241585.3-202ENST00000628937 1088 ntBASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 AC245100.8-202ENST00000629247 1058 ntBASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms