Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF1Q9H7N4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF1Q9H7N4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF1Q9H7N4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 UBE2DNL-204ENST00000602536 740 ntBASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
SCAF1Q9H7N4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SCAF1Q9H7N4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
SCAF1Q9H7N4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC30.9■■■□□ 2.54
SCAF1Q9H7N4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
SCAF1Q9H7N4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
SCAF1Q9H7N4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
SCAF1Q9H7N4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SCAF1Q9H7N4 AC006058.3-201ENST00000606217 1069 ntBASIC30.9■■■□□ 2.54
SCAF1Q9H7N4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC30.9■■■□□ 2.54
SCAF1Q9H7N4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
SCAF1Q9H7N4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
SCAF1Q9H7N4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SCAF1Q9H7N4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC30.89■■■□□ 2.54
SCAF1Q9H7N4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC30.89■■■□□ 2.54
SCAF1Q9H7N4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SCAF1Q9H7N4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SCAF1Q9H7N4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SCAF1Q9H7N4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SCAF1Q9H7N4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
SCAF1Q9H7N4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC30.89■■■□□ 2.54
SCAF1Q9H7N4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SCAF1Q9H7N4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC30.89■■■□□ 2.54
SCAF1Q9H7N4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC30.89■■■□□ 2.53
SCAF1Q9H7N4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.53
SCAF1Q9H7N4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 ADM-205ENST00000528544 586 ntTSL 2 BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 AC012183.1-201ENST00000625197 499 ntBASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SCAF1Q9H7N4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC30.87■■■□□ 2.53
SCAF1Q9H7N4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF1Q9H7N4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF1Q9H7N4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF1Q9H7N4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC30.87■■■□□ 2.53
SCAF1Q9H7N4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC30.87■■■□□ 2.53
SCAF1Q9H7N4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF1Q9H7N4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF1Q9H7N4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF1Q9H7N4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
SCAF1Q9H7N4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
SCAF1Q9H7N4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
SCAF1Q9H7N4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
SCAF1Q9H7N4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SCAF1Q9H7N4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms