Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SUDS3Q9H7L9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SUDS3Q9H7L9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.28■■□□□ 1
SUDS3Q9H7L9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.28■■□□□ 1
SUDS3Q9H7L9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SUDS3Q9H7L9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.28■■□□□ 1
SUDS3Q9H7L9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SUDS3Q9H7L9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SUDS3Q9H7L9 AC009237.3-201ENST00000393279 1427 ntBASIC21.28■■□□□ 1
SUDS3Q9H7L9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.28■■□□□ 1
SUDS3Q9H7L9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SUDS3Q9H7L9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.28■■□□□ 1
SUDS3Q9H7L9 AC005224.4-201ENST00000583262 1652 ntBASIC21.28■■□□□ 1
SUDS3Q9H7L9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.28■■□□□ 1
SUDS3Q9H7L9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SUDS3Q9H7L9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SUDS3Q9H7L9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.27■■□□□ 1
SUDS3Q9H7L9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.27■■□□□ 1
SUDS3Q9H7L9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SUDS3Q9H7L9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.27■■□□□ 1
SUDS3Q9H7L9 AC055733.4-201ENST00000638462 1354 ntBASIC21.27■■□□□ 1
SUDS3Q9H7L9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SUDS3Q9H7L9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.27■■□□□ 1
SUDS3Q9H7L9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SUDS3Q9H7L9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.27■■□□□ 1
SUDS3Q9H7L9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.27■■□□□ 1
SUDS3Q9H7L9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SUDS3Q9H7L9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
SUDS3Q9H7L9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SUDS3Q9H7L9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 AC079140.4-201ENST00000507448 529 ntBASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 KRT18P61-201ENST00000585825 1298 ntBASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 AL137784.2-201ENST00000607332 1000 ntBASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SUDS3Q9H7L9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 Z98882.1-201ENST00000622160 2253 ntBASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 AC004911.1-201ENST00000416316 871 ntBASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 AC004854.2-201ENST00000608450 1441 ntBASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.25■□□□□ 0.99
SUDS3Q9H7L9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.24■□□□□ 0.99
SUDS3Q9H7L9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SUDS3Q9H7L9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SUDS3Q9H7L9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SUDS3Q9H7L9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SUDS3Q9H7L9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms