Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP13A3Q9H7F0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A3Q9H7F0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP13A3Q9H7F0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.14■□□□□ 0.98
ATP13A3Q9H7F0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
ATP13A3Q9H7F0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP13A3Q9H7F0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP13A3Q9H7F0 LINC00565-201ENST00000562710 2331 ntBASIC21.14■□□□□ 0.97
ATP13A3Q9H7F0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.14■□□□□ 0.97
ATP13A3Q9H7F0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ATP13A3Q9H7F0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A3Q9H7F0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP13A3Q9H7F0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A3Q9H7F0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A3Q9H7F0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A3Q9H7F0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A3Q9H7F0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
ATP13A3Q9H7F0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 AC073111.5-205ENST00000641717 521 ntBASIC21.13■□□□□ 0.97
ATP13A3Q9H7F0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 DUX4L16-201ENST00000555130 1264 ntBASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 RARRES2P11-201ENST00000635158 484 ntBASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A3Q9H7F0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 TERF1P5-201ENST00000477545 1207 ntBASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A3Q9H7F0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A3Q9H7F0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A3Q9H7F0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP13A3Q9H7F0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A3Q9H7F0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP13A3Q9H7F0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP13A3Q9H7F0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A3Q9H7F0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A3Q9H7F0 CDCA4P2-201ENST00000441182 718 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms