Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
EBF3Q9H4W6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
EBF3Q9H4W6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
EBF3Q9H4W6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EBF3Q9H4W6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
EBF3Q9H4W6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EBF3Q9H4W6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
EBF3Q9H4W6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EBF3Q9H4W6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.77■■□□□ 1.08
EBF3Q9H4W6 AC069236.1-201ENST00000604339 616 ntBASIC21.77■■□□□ 1.08
EBF3Q9H4W6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.77■■□□□ 1.08
EBF3Q9H4W6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
EBF3Q9H4W6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EBF3Q9H4W6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EBF3Q9H4W6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
EBF3Q9H4W6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
EBF3Q9H4W6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 FAM201B-201ENST00000458407 597 ntBASIC21.76■■□□□ 1.07
EBF3Q9H4W6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EBF3Q9H4W6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.75■■□□□ 1.07
EBF3Q9H4W6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
EBF3Q9H4W6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 ECEL1P1-201ENST00000373592 1742 ntBASIC21.74■■□□□ 1.07
EBF3Q9H4W6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EBF3Q9H4W6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 AL512625.2-201ENST00000417533 625 ntBASIC21.73■■□□□ 1.07
EBF3Q9H4W6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 RNA5SP413-201ENST00000516373 109 ntBASIC21.73■■□□□ 1.07
EBF3Q9H4W6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 AC061975.6-201ENST00000579045 1553 ntBASIC21.73■■□□□ 1.07
EBF3Q9H4W6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EBF3Q9H4W6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
EBF3Q9H4W6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.72■■□□□ 1.07
EBF3Q9H4W6 KRT16P2-201ENST00000414673 1423 ntBASIC21.72■■□□□ 1.07
EBF3Q9H4W6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EBF3Q9H4W6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EBF3Q9H4W6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
EBF3Q9H4W6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.72■■□□□ 1.07
EBF3Q9H4W6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
EBF3Q9H4W6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.72■■□□□ 1.07
EBF3Q9H4W6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EBF3Q9H4W6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms