Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 TERF1P5-201ENST00000477545 1207 ntBASIC22.96■■□□□ 1.27
RNF39Q9H2S5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.96■■□□□ 1.27
RNF39Q9H2S5 KRT8P2-201ENST00000556193 944 ntBASIC22.96■■□□□ 1.27
RNF39Q9H2S5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF39Q9H2S5 AC073578.4-201ENST00000623945 514 ntBASIC22.96■■□□□ 1.27
RNF39Q9H2S5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF39Q9H2S5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF39Q9H2S5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF39Q9H2S5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF39Q9H2S5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF39Q9H2S5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.95■■□□□ 1.26
RNF39Q9H2S5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RNF39Q9H2S5 GUSBP6-202ENST00000438529 1198 ntBASIC22.95■■□□□ 1.26
RNF39Q9H2S5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
RNF39Q9H2S5 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC22.95■■□□□ 1.26
RNF39Q9H2S5 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC22.95■■□□□ 1.26
RNF39Q9H2S5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
RNF39Q9H2S5 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF39Q9H2S5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF39Q9H2S5 AC010542.4-201ENST00000563151 1910 ntBASIC22.95■■□□□ 1.26
RNF39Q9H2S5 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF39Q9H2S5 AP001542.1-201ENST00000591314 200 ntBASIC22.95■■□□□ 1.26
RNF39Q9H2S5 AL121832.2-201ENST00000610979 668 ntBASIC22.95■■□□□ 1.26
RNF39Q9H2S5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF39Q9H2S5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF39Q9H2S5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF39Q9H2S5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF39Q9H2S5 AC061975.6-201ENST00000579045 1553 ntBASIC22.94■■□□□ 1.26
RNF39Q9H2S5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RNF39Q9H2S5 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF39Q9H2S5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
RNF39Q9H2S5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.94■■□□□ 1.26
RNF39Q9H2S5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RNF39Q9H2S5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF39Q9H2S5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF39Q9H2S5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF39Q9H2S5 AC006213.5-201ENST00000619673 288 ntBASIC22.94■■□□□ 1.26
RNF39Q9H2S5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF39Q9H2S5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF39Q9H2S5 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC22.93■■□□□ 1.26
RNF39Q9H2S5 TSPY6P-201ENST00000448518 926 ntBASIC22.93■■□□□ 1.26
RNF39Q9H2S5 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC22.93■■□□□ 1.26
RNF39Q9H2S5 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC22.93■■□□□ 1.26
RNF39Q9H2S5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF39Q9H2S5 AC008175.2-201ENST00000612840 297 ntBASIC22.93■■□□□ 1.26
RNF39Q9H2S5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.93■■□□□ 1.26
RNF39Q9H2S5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF39Q9H2S5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.93■■□□□ 1.26
RNF39Q9H2S5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF39Q9H2S5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RNF39Q9H2S5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
RNF39Q9H2S5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RNF39Q9H2S5 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC22.92■■□□□ 1.26
RNF39Q9H2S5 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF39Q9H2S5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.92■■□□□ 1.26
RNF39Q9H2S5 AC055748.1-201ENST00000489836 959 ntBASIC22.92■■□□□ 1.26
RNF39Q9H2S5 SETP12-201ENST00000514068 805 ntBASIC22.92■■□□□ 1.26
RNF39Q9H2S5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.92■■□□□ 1.26
RNF39Q9H2S5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.92■■□□□ 1.26
RNF39Q9H2S5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.92■■□□□ 1.26
RNF39Q9H2S5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RNF39Q9H2S5 FAM99A-202ENST00000538190 1989 ntBASIC22.91■■□□□ 1.26
RNF39Q9H2S5 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC22.91■■□□□ 1.26
RNF39Q9H2S5 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC22.91■■□□□ 1.26
RNF39Q9H2S5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF39Q9H2S5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.91■■□□□ 1.26
RNF39Q9H2S5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC22.91■■□□□ 1.26
RNF39Q9H2S5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.91■■□□□ 1.26
RNF39Q9H2S5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF39Q9H2S5 AC068338.2-201ENST00000563278 1430 ntBASIC22.91■■□□□ 1.26
RNF39Q9H2S5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.9■■□□□ 1.26
RNF39Q9H2S5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.89■■□□□ 1.26
RNF39Q9H2S5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF39Q9H2S5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
RNF39Q9H2S5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF39Q9H2S5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF39Q9H2S5 POU5F1P4-201ENST00000413175 1085 ntBASIC22.89■■□□□ 1.25
RNF39Q9H2S5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.89■■□□□ 1.25
RNF39Q9H2S5 AL022328.3-201ENST00000607943 679 ntBASIC22.89■■□□□ 1.25
RNF39Q9H2S5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.89■■□□□ 1.25
RNF39Q9H2S5 AC013268.1-206ENST00000638368 961 ntBASIC22.89■■□□□ 1.25
RNF39Q9H2S5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.89■■□□□ 1.25
RNF39Q9H2S5 AC112229.1-201ENST00000639295 961 ntBASIC22.89■■□□□ 1.25
RNF39Q9H2S5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RNF39Q9H2S5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF39Q9H2S5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
RNF39Q9H2S5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.88■■□□□ 1.25
RNF39Q9H2S5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms