Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
VPS33BQ9H267 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
VPS33BQ9H267 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
VPS33BQ9H267 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
VPS33BQ9H267 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
VPS33BQ9H267 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
VPS33BQ9H267 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
VPS33BQ9H267 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
VPS33BQ9H267 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
VPS33BQ9H267 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
VPS33BQ9H267 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.42■■□□□ 1.66
VPS33BQ9H267 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
VPS33BQ9H267 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.41■■□□□ 1.66
VPS33BQ9H267 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VPS33BQ9H267 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.41■■□□□ 1.66
VPS33BQ9H267 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS33BQ9H267 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.41■■□□□ 1.66
VPS33BQ9H267 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS33BQ9H267 FAM210CP-201ENST00000445714 574 ntBASIC25.41■■□□□ 1.66
VPS33BQ9H267 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.41■■□□□ 1.66
VPS33BQ9H267 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC25.41■■□□□ 1.66
VPS33BQ9H267 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
VPS33BQ9H267 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.41■■□□□ 1.66
VPS33BQ9H267 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS33BQ9H267 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.41■■□□□ 1.66
VPS33BQ9H267 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS33BQ9H267 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
VPS33BQ9H267 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
VPS33BQ9H267 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS33BQ9H267 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS33BQ9H267 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS33BQ9H267 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
VPS33BQ9H267 POM121L13P-201ENST00000422362 380 ntBASIC25.4■■□□□ 1.66
VPS33BQ9H267 ECEL1P3-201ENST00000427961 737 ntBASIC25.4■■□□□ 1.66
VPS33BQ9H267 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC25.4■■□□□ 1.66
VPS33BQ9H267 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS33BQ9H267 SOX15-203ENST00000570788 1093 ntBASIC25.4■■□□□ 1.66
VPS33BQ9H267 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.4■■□□□ 1.66
VPS33BQ9H267 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS33BQ9H267 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
VPS33BQ9H267 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS33BQ9H267 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
VPS33BQ9H267 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
VPS33BQ9H267 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
VPS33BQ9H267 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
VPS33BQ9H267 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
VPS33BQ9H267 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
VPS33BQ9H267 AC007322.3-201ENST00000426526 701 ntBASIC25.39■■□□□ 1.66
VPS33BQ9H267 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
VPS33BQ9H267 SNORA78-201ENST00000459373 127 ntBASIC25.39■■□□□ 1.66
VPS33BQ9H267 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
VPS33BQ9H267 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
VPS33BQ9H267 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.39■■□□□ 1.66
VPS33BQ9H267 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.39■■□□□ 1.65
VPS33BQ9H267 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
VPS33BQ9H267 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
VPS33BQ9H267 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
VPS33BQ9H267 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.38■■□□□ 1.65
VPS33BQ9H267 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
VPS33BQ9H267 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS33BQ9H267 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
VPS33BQ9H267 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS33BQ9H267 AC092053.2-201ENST00000640557 1818 ntBASIC25.38■■□□□ 1.65
VPS33BQ9H267 AC211429.1-201ENST00000415277 523 ntBASIC25.38■■□□□ 1.65
VPS33BQ9H267 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS33BQ9H267 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.38■■□□□ 1.65
VPS33BQ9H267 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.38■■□□□ 1.65
VPS33BQ9H267 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.38■■□□□ 1.65
VPS33BQ9H267 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
VPS33BQ9H267 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.38■■□□□ 1.65
VPS33BQ9H267 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.38■■□□□ 1.65
VPS33BQ9H267 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS33BQ9H267 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.37■■□□□ 1.65
VPS33BQ9H267 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VPS33BQ9H267 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
VPS33BQ9H267 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS33BQ9H267 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VPS33BQ9H267 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS33BQ9H267 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VPS33BQ9H267 AC012618.2-201ENST00000428058 849 ntBASIC25.37■■□□□ 1.65
VPS33BQ9H267 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.37■■□□□ 1.65
VPS33BQ9H267 AC233263.1-201ENST00000578059 224 ntBASIC25.37■■□□□ 1.65
VPS33BQ9H267 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VPS33BQ9H267 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
VPS33BQ9H267 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS33BQ9H267 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.37■■□□□ 1.65
VPS33BQ9H267 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VPS33BQ9H267 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VPS33BQ9H267 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VPS33BQ9H267 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VPS33BQ9H267 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VPS33BQ9H267 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.36■■□□□ 1.65
VPS33BQ9H267 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.36■■□□□ 1.65
VPS33BQ9H267 LINC01023-201ENST00000606054 436 ntBASIC25.36■■□□□ 1.65
VPS33BQ9H267 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.36■■□□□ 1.65
VPS33BQ9H267 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
VPS33BQ9H267 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
VPS33BQ9H267 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
VPS33BQ9H267 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC25.35■■□□□ 1.65
VPS33BQ9H267 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms