Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ATXN2L-221ENST00000566946 2162 ntTSL 1 (best)21.5■■□□□ 1.032e-18■■■■□ 25.5
XRN2Q9H0D6 ATXN2L-208ENST00000562583 1933 ntTSL 1 (best)20.02■□□□□ 0.792e-18■■■■□ 25.5
XRN2Q9H0D6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.797e-8■■■■□ 25.5
XRN2Q9H0D6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.737e-8■■■■□ 25.5
XRN2Q9H0D6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.82■□□□□ 0.447e-8■■■■□ 25.5
XRN2Q9H0D6 SH3BP2-223ENST00000512131 615 ntTSL 220.45■□□□□ 0.861e-6■■■■□ 25.5
XRN2Q9H0D6 PRR7-AS1-202ENST00000506465 421 ntTSL 37.99□□□□□ -1.137e-7■■■■□ 25.5
XRN2Q9H0D6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.9■■□□□ 1.12e-6■■■■□ 25.5
XRN2Q9H0D6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.072e-6■■■■□ 25.5
XRN2Q9H0D6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.072e-6■■■■□ 25.5
XRN2Q9H0D6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.052e-6■■■■□ 25.5
XRN2Q9H0D6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.982e-6■■■■□ 25.5
XRN2Q9H0D6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.972e-6■■■■□ 25.5
XRN2Q9H0D6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.972e-6■■■■□ 25.5
XRN2Q9H0D6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.942e-6■■■■□ 25.5
XRN2Q9H0D6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.59■□□□□ 0.412e-6■■■■□ 25.5
XRN2Q9H0D6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.02■□□□□ 0.322e-6■■■■□ 25.5
XRN2Q9H0D6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.1■□□□□ 0.172e-6■■■■□ 25.5
XRN2Q9H0D6 ADAP1-203ENST00000437486 622 ntTSL 524.76■■□□□ 1.555e-6■■■■□ 25.5
XRN2Q9H0D6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.74■□□□□ 0.915e-6■■■■□ 25.5
XRN2Q9H0D6 ADAP1-204ENST00000446141 2085 ntTSL 219.82■□□□□ 0.765e-6■■■■□ 25.5
XRN2Q9H0D6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.23■□□□□ 0.675e-6■■■■□ 25.5
XRN2Q9H0D6 ADAP1-213ENST00000488527 584 ntTSL 517.92■□□□□ 0.465e-6■■■■□ 25.5
XRN2Q9H0D6 AC007952.4-201ENST00000573866 637 ntBASIC16.4■□□□□ 0.226e-21■■■■□ 25.5
XRN2Q9H0D6 ADAP1-207ENST00000453823 560 ntTSL 415.44■□□□□ 0.065e-6■■■■□ 25.5
XRN2Q9H0D6 SNORD3D-202ENST00000630092 217 ntBASIC12.62□□□□□ -0.396e-21■■■■□ 25.5
XRN2Q9H0D6 SNORD3D-201ENST00000619178 218 ntBASIC12.31□□□□□ -0.446e-21■■■■□ 25.5
XRN2Q9H0D6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.123e-7■■■■□ 25.4
XRN2Q9H0D6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.99■□□□□ 0.631e-11■■■■□ 25.4
XRN2Q9H0D6 KDM2A-207ENST00000526258 5671 ntTSL 1 (best)12.39□□□□□ -0.431e-11■■■■□ 25.4
XRN2Q9H0D6 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.461e-11■■■■□ 25.4
XRN2Q9H0D6 KDM2A-203ENST00000517637 463 ntTSL 312.06□□□□□ -0.481e-11■■■■□ 25.4
XRN2Q9H0D6 KDM2A-201ENST00000308783 3666 ntTSL 1 (best) BASIC10.57□□□□□ -0.721e-11■■■■□ 25.4
XRN2Q9H0D6 KDM2A-212ENST00000530342 3651 ntTSL 1 (best) BASIC10.33□□□□□ -0.761e-11■■■■□ 25.4
XRN2Q9H0D6 KDM2A-213ENST00000531696 4160 ntTSL 510.29□□□□□ -0.761e-11■■■■□ 25.4
XRN2Q9H0D6 KDM2A-205ENST00000525041 697 ntTSL 49.85□□□□□ -0.831e-11■■■■□ 25.4
XRN2Q9H0D6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.593e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.573e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-220ENST00000519767 970 ntTSL 1 (best)30.46■■■□□ 2.473e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.473e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.45■■■□□ 2.473e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.413e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.09■■■□□ 2.413e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.413e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.09■■■□□ 2.413e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.09■■■□□ 2.413e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.413e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.09■■■□□ 2.413e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.09■■■□□ 2.413e-7■■■■□ 25.4
XRN2Q9H0D6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.083e-7■■■■□ 25.4
XRN2Q9H0D6 ERICH1-209ENST00000523415 3630 ntTSL 28.62□□□□□ -1.036e-7■■■■□ 25.4
XRN2Q9H0D6 AKT2-239ENST00000583859 567 ntTSL 530.15■■■□□ 2.421e-12■■■■□ 25.4
XRN2Q9H0D6 AKT2-203ENST00000391844 1795 ntTSL 1 (best)27.64■■■□□ 2.021e-12■■■■□ 25.4
XRN2Q9H0D6 AKT2-214ENST00000456441 582 ntTSL 326.35■■□□□ 1.811e-12■■■■□ 25.4
XRN2Q9H0D6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.28■■□□□ 11e-12■■■■□ 25.4
XRN2Q9H0D6 AKT2-240ENST00000584288 1706 ntTSL 220.99■□□□□ 0.951e-12■■■■□ 25.4
XRN2Q9H0D6 AKT2-213ENST00000452077 577 ntTSL 314.45□□□□□ -0.11e-12■■■■□ 25.4
XRN2Q9H0D6 AKT2-229ENST00000578123 564 ntTSL 413.34□□□□□ -0.271e-12■■■■□ 25.4
XRN2Q9H0D6 AKT2-241ENST00000596634 583 ntTSL 512.34□□□□□ -0.431e-12■■■■□ 25.4
XRN2Q9H0D6 AKT2-202ENST00000358335 546 ntTSL 412.11□□□□□ -0.471e-12■■■■□ 25.4
XRN2Q9H0D6 RNA5SP304-201ENST00000411199 104 ntBASIC10.66□□□□□ -0.71e-12■■■■□ 25.4
XRN2Q9H0D6 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.911e-12■■■■□ 25.4
XRN2Q9H0D6 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.961e-12■■■■□ 25.4
XRN2Q9H0D6 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC9.01□□□□□ -0.971e-12■■■■□ 25.4
XRN2Q9H0D6 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.221e-12■■■■□ 25.4
XRN2Q9H0D6 TBL1XR1-214ENST00000457928 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.616e-9■■■■□ 25.4
XRN2Q9H0D6 TBL1XR1-224ENST00000635794 768 ntTSL 55.67□□□□□ -1.56e-9■■■■□ 25.4
XRN2Q9H0D6 TBL1XR1-232ENST00000637544 214 ntTSL 52.95□□□□□ -1.946e-9■■■■□ 25.4
XRN2Q9H0D6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.31■■□□□ 1.643e-6■■■■□ 25.3
XRN2Q9H0D6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.15■■□□□ 1.463e-6■■■■□ 25.3
XRN2Q9H0D6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.343e-6■■■■□ 25.3
XRN2Q9H0D6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.62■■□□□ 1.213e-6■■■■□ 25.3
XRN2Q9H0D6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.5■□□□□ 0.873e-6■■■■□ 25.3
XRN2Q9H0D6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.66■□□□□ 0.91e-6■■■■□ 25.3
XRN2Q9H0D6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 01e-6■■■■□ 25.3
XRN2Q9H0D6 MED16-210ENST00000606248 3181 ntTSL 1 (best)13.52□□□□□ -0.241e-6■■■■□ 25.3
XRN2Q9H0D6 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.331e-6■■■■□ 25.3
XRN2Q9H0D6 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.331e-6■■■■□ 25.3
XRN2Q9H0D6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.861e-6■■■■□ 25.3
XRN2Q9H0D6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.891e-7■■■■□ 25.3
XRN2Q9H0D6 ANKRD11-213ENST00000567736 2750 ntTSL 215.06■□□□□ 01e-6■■■■□ 25.3
XRN2Q9H0D6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.021e-7■■■■□ 25.2
XRN2Q9H0D6 TNK2-216ENST00000468819 876 ntTSL 1 (best)23.35■■□□□ 1.331e-7■■■■□ 25.2
XRN2Q9H0D6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC37.42■■■■□ 3.584e-8■■■■□ 25.2
XRN2Q9H0D6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC36.3■■■■□ 3.43e-7■■■■□ 25.2
XRN2Q9H0D6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.88■■■■□ 3.173e-7■■■■□ 25.2
XRN2Q9H0D6 POGK-203ENST00000449930 954 ntTSL 233.03■■■□□ 2.888e-8■■■■□ 25.2
XRN2Q9H0D6 TAPT1-AS1-202ENST00000573308 1031 ntTSL 232.78■■■□□ 2.844e-8■■■■□ 25.2
XRN2Q9H0D6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.18■■■□□ 2.743e-7■■■■□ 25.2
XRN2Q9H0D6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.584e-8■■■■□ 25.2
XRN2Q9H0D6 PRKAR1B-202ENST00000400758 888 ntTSL 329.75■■■□□ 2.359e-6■■■■□ 25.2
XRN2Q9H0D6 MIR663AHG-214ENST00000597267 653 ntTSL 528.98■■■□□ 2.234e-15■■■■□ 25.2
XRN2Q9H0D6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.91■■■□□ 2.221e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.91■■■□□ 2.221e-11■■■■□ 25.2
XRN2Q9H0D6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.55■■■□□ 2.164e-8■■■■□ 25.2
XRN2Q9H0D6 PHF23-208ENST00000574236 583 ntTSL 327.85■■■□□ 2.057e-8■■■■□ 25.2
XRN2Q9H0D6 PHF23-211ENST00000574899 370 ntTSL 327.85■■■□□ 2.057e-8■■■■□ 25.2
XRN2Q9H0D6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.81■■■□□ 2.046e-6■■■■□ 25.2
XRN2Q9H0D6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.924e-8■■■■□ 25.2
XRN2Q9H0D6 AKT1S1-209ENST00000599525 438 ntTSL 426.39■■□□□ 1.824e-8■■■■□ 25.2
Retrieved 100 of 21,068 protein–RNA pairs in 130.9 ms