RNA–Protein interactions for RNA: ENST00000531696.5

KDM2A-213, Transcript of lysine demethylase 2A, humanhuman

TSL 5

Gene KDM2A, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-213ENST00000531696 PELP1Q8IZL8 1130 aaKnown RBP18.92■□□□□ 0.62
KDM2A-213ENST00000531696 MYT1Q01538 1121 aa18.51■□□□□ 0.55
KDM2A-213ENST00000531696 PCGF6Q9BYE7 350 aa18.13■□□□□ 0.49
KDM2A-213ENST00000531696 HRCP23327 699 aa18.07■□□□□ 0.48
KDM2A-213ENST00000531696 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
KDM2A-213ENST00000531696 SUPT5HO00267 1087 aaKnown RBP17.65■□□□□ 0.42
KDM2A-213ENST00000531696 CENPBP07199 599 aaPredicted RBP17.53■□□□□ 0.4
KDM2A-213ENST00000531696 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
KDM2A-213ENST00000531696 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
KDM2A-213ENST00000531696 GTF3C3Q9Y5Q9 886 aa17.29■□□□□ 0.36
KDM2A-213ENST00000531696 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
KDM2A-213ENST00000531696 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
KDM2A-213ENST00000531696 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
KDM2A-213ENST00000531696 EHMT2Q96KQ7 1210 aa17.07■□□□□ 0.32
KDM2A-213ENST00000531696 ACIN1Q9UKV3 1341 aaKnown RBP17.06■□□□□ 0.32
KDM2A-213ENST00000531696 BCL11AQ9H165 835 aa17.01■□□□□ 0.31
KDM2A-213ENST00000531696 ERICH6Q7L0X2 663 aa16.99■□□□□ 0.31
KDM2A-213ENST00000531696 NEUROD1Q13562 356 aa16.94■□□□□ 0.3
KDM2A-213ENST00000531696 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
KDM2A-213ENST00000531696 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
KDM2A-213ENST00000531696 DIEXFQ68CQ4 756 aaKnown RBP16.75■□□□□ 0.27
KDM2A-213ENST00000531696 LOC105371045A0A1W2PR82 267 aa16.69■□□□□ 0.26
KDM2A-213ENST00000531696 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
KDM2A-213ENST00000531696 FAM9AQ8IZU1 332 aaPredicted RBP16.61■□□□□ 0.25
KDM2A-213ENST00000531696 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
KDM2A-213ENST00000531696 NISCHQ9Y2I1 1504 aa16.59■□□□□ 0.25
KDM2A-213ENST00000531696 ANP32EQ9BTT0 268 aa16.54■□□□□ 0.24
KDM2A-213ENST00000531696 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
KDM2A-213ENST00000531696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
KDM2A-213ENST00000531696 BCANQ96GW7 911 aa16.48■□□□□ 0.23
KDM2A-213ENST00000531696 NEFLP07196 543 aa16.41■□□□□ 0.22
KDM2A-213ENST00000531696 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
KDM2A-213ENST00000531696 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
KDM2A-213ENST00000531696 RTL5Q5HYW3 569 aaPredicted RBP16.14■□□□□ 0.17
KDM2A-213ENST00000531696 ZNF316A6NFI3 1004 aaPredicted RBP16.08■□□□□ 0.16
KDM2A-213ENST00000531696 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
KDM2A-213ENST00000531696 CCDC136Q96JN2 1154 aa16.02■□□□□ 0.15
KDM2A-213ENST00000531696 NBR1Q14596 966 aa16■□□□□ 0.15
KDM2A-213ENST00000531696 MIER1Q8N108 512 aa16■□□□□ 0.15
KDM2A-213ENST00000531696 TRIM41Q8WV44 630 aa16■□□□□ 0.15
KDM2A-213ENST00000531696 FKBP8Q14318 412 aa15.96■□□□□ 0.15
KDM2A-213ENST00000531696 MYO15BQ96JP2 1530 aa15.96■□□□□ 0.15
KDM2A-213ENST00000531696 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.94■□□□□ 0.14
KDM2A-213ENST00000531696 ANO8Q9HCE9 1232 aaPredicted RBP15.94■□□□□ 0.14
KDM2A-213ENST00000531696 TSHZ2Q9NRE2 1034 aa15.93■□□□□ 0.14
KDM2A-213ENST00000531696 ITGAEP38570 1179 aa15.91■□□□□ 0.14
KDM2A-213ENST00000531696 SUPT16HQ9Y5B9 1047 aaKnown RBP15.9■□□□□ 0.14
KDM2A-213ENST00000531696 DCAF1Q9Y4B6 1507 aa15.88■□□□□ 0.13
KDM2A-213ENST00000531696 CDK11AQ9UQ88 783 aaPredicted RBP15.88■□□□□ 0.13
KDM2A-213ENST00000531696 DEKP35659 375 aaKnown RBP15.84■□□□□ 0.13
KDM2A-213ENST00000531696 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
KDM2A-213ENST00000531696 MYT1LQ9UL68 1186 aa15.8■□□□□ 0.12
KDM2A-213ENST00000531696 CLSPNQ9HAW4 1339 aa15.78■□□□□ 0.12
KDM2A-213ENST00000531696 APLP2Q06481 763 aa15.78■□□□□ 0.12
KDM2A-213ENST00000531696 RBM19Q9Y4C8 960 aaKnown RBP15.74■□□□□ 0.11
KDM2A-213ENST00000531696 GLIPR1L2Q4G1C9 344 aa15.73■□□□□ 0.11
KDM2A-213ENST00000531696 SALL2Q9Y467 1007 aaPredicted RBP15.66■□□□□ 0.1
KDM2A-213ENST00000531696 RANGAP1P46060 587 aaPredicted RBP15.64■□□□□ 0.09
KDM2A-213ENST00000531696 DAXXQ9UER7 740 aaPredicted RBP15.63■□□□□ 0.09
KDM2A-213ENST00000531696 SLC24A1O60721 1099 aa15.62■□□□□ 0.09
KDM2A-213ENST00000531696 IRX6P78412 446 aaPredicted RBP15.57■□□□□ 0.08
KDM2A-213ENST00000531696 NPM2Q86SE8 214 aaKnown RBP15.56■□□□□ 0.08
KDM2A-213ENST00000531696 ANP32AP39687 249 aaKnown RBP15.54■□□□□ 0.08
KDM2A-213ENST00000531696 CCDC180Q9P1Z9 1646 aa15.53■□□□□ 0.08
KDM2A-213ENST00000531696 TRIM52Q96A61 297 aa15.53■□□□□ 0.08
KDM2A-213ENST00000531696 UBTFP17480 764 aaKnown RBP15.52■□□□□ 0.08
KDM2A-213ENST00000531696 PKNOX2Q96KN3 472 aa15.47■□□□□ 0.07
KDM2A-213ENST00000531696 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
KDM2A-213ENST00000531696 CNGB1Q14028 1251 aaPredicted RBP15.45■□□□□ 0.06
KDM2A-213ENST00000531696 PODXL2Q9NZ53 605 aa15.4■□□□□ 0.06
KDM2A-213ENST00000531696 ERICH6BQ5W0A0 696 aa15.39■□□□□ 0.05
KDM2A-213ENST00000531696 TIMELESSQ9UNS1 1208 aa15.38■□□□□ 0.05
KDM2A-213ENST00000531696 NOP58Q9Y2X3 529 aaKnown RBP15.38■□□□□ 0.05
KDM2A-213ENST00000531696 VSIG10Q8N0Z9 540 aa15.37■□□□□ 0.05
KDM2A-213ENST00000531696 NEFMP07197 916 aa15.36■□□□□ 0.05
KDM2A-213ENST00000531696 IL27Q8NEV9 243 aa15.35■□□□□ 0.05
KDM2A-213ENST00000531696 ARXQ96QS3 562 aa15.33■□□□□ 0.04
KDM2A-213ENST00000531696 LAS1LQ9Y4W2 734 aaKnown RBP15.32■□□□□ 0.04
KDM2A-213ENST00000531696 ANP32CO43423 234 aa15.32■□□□□ 0.04
KDM2A-213ENST00000531696 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
KDM2A-213ENST00000531696 UBE2Q2Q8WVN8 375 aa15.3■□□□□ 0.04
KDM2A-213ENST00000531696 A0A0U1RQG5 324 aaPredicted RBP15.29■□□□□ 0.04
KDM2A-213ENST00000531696 HNRNPUQ00839 825 aaKnown RBP eCLIP15.27■□□□□ 0.03
KDM2A-213ENST00000531696 NAP1L5Q96NT1 182 aaPredicted RBP15.21■□□□□ 0.03
KDM2A-213ENST00000531696 ARID4BQ4LE39 1312 aaPredicted RBP15.2■□□□□ 0.02
KDM2A-213ENST00000531696 MSH5O43196 834 aa15.19■□□□□ 0.02
KDM2A-213ENST00000531696 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
KDM2A-213ENST00000531696 B4GALNT3Q6L9W6 998 aa15.14■□□□□ 0.01
KDM2A-213ENST00000531696 POLR3GLQ9BT43 218 aa15.13■□□□□ 0.01
KDM2A-213ENST00000531696 KCNH8Q96L42 1107 aa15.12■□□□□ 0.01
KDM2A-213ENST00000531696 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
KDM2A-213ENST00000531696 FANCIQ9NVI1 1328 aa15.09■□□□□ 0.01
KDM2A-213ENST00000531696 AMER1Q5JTC6 1135 aaPredicted RBP15.04■□□□□ -0
KDM2A-213ENST00000531696 HSP90AA2PQ14568 343 aaPredicted RBP15.01□□□□□ -0.01
KDM2A-213ENST00000531696 FAM9BQ8IZU0 186 aa15.01□□□□□ -0.01
KDM2A-213ENST00000531696 PPP4R2Q9NY27 417 aa15□□□□□ -0.01
KDM2A-213ENST00000531696 PPM1GO15355 546 aaPredicted RBP15□□□□□ -0.01
KDM2A-213ENST00000531696 RSPH6AQ9H0K4 717 aa15□□□□□ -0.01
KDM2A-213ENST00000531696 BRPF3Q9ULD4 1205 aa14.99□□□□□ -0.01
KDM2A-213ENST00000531696 HSP90AA1P07900 732 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms