Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 FAM197Y1-201ENST00000421178 764 ntBASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 LINC01238-205ENST00000567549 1107 ntBASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 AL034346.1-201ENST00000568244 1277 ntBASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL25A1Q9BXS0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 AL031133.1-201ENST00000406807 723 ntBASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 LIN28AP1-201ENST00000429574 405 ntBASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 AC093458.2-201ENST00000623150 629 ntBASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
COL25A1Q9BXS0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
COL25A1Q9BXS0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.58■■□□□ 1.04
COL25A1Q9BXS0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.58■■□□□ 1.04
COL25A1Q9BXS0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL25A1Q9BXS0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL25A1Q9BXS0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL25A1Q9BXS0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.57■■□□□ 1.04
COL25A1Q9BXS0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.57■■□□□ 1.04
COL25A1Q9BXS0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.57■■□□□ 1.04
COL25A1Q9BXS0 MYC-208ENST00000641036 567 ntBASIC21.57■■□□□ 1.04
COL25A1Q9BXS0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL25A1Q9BXS0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 AK4P3-201ENST00000418260 669 ntBASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 AC063952.2-201ENST00000498792 1227 ntBASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL25A1Q9BXS0 KRT16P2-201ENST00000414673 1423 ntBASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 AL390955.1-201ENST00000428694 934 ntBASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 HCG4P8-203ENST00000443049 980 ntBASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 ATP5G1P1-201ENST00000448724 379 ntBASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 FDX1P1-201ENST00000449115 551 ntBASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 FAM21FP-204ENST00000608637 956 ntBASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.55■■□□□ 1.04
COL25A1Q9BXS0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.54■■□□□ 1.04
COL25A1Q9BXS0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL25A1Q9BXS0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.54■■□□□ 1.04
COL25A1Q9BXS0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.54■■□□□ 1.04
COL25A1Q9BXS0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.54■■□□□ 1.04
COL25A1Q9BXS0 AC120498.8-201ENST00000614275 531 ntBASIC21.54■■□□□ 1.04
COL25A1Q9BXS0 REXO1L10P-201ENST00000615707 1290 ntBASIC21.54■■□□□ 1.04
COL25A1Q9BXS0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL25A1Q9BXS0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
COL25A1Q9BXS0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL25A1Q9BXS0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL25A1Q9BXS0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.53■■□□□ 1.04
COL25A1Q9BXS0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL25A1Q9BXS0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL25A1Q9BXS0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
COL25A1Q9BXS0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.53■■□□□ 1.04
COL25A1Q9BXS0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL25A1Q9BXS0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
COL25A1Q9BXS0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.53■■□□□ 1.04
COL25A1Q9BXS0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
COL25A1Q9BXS0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL25A1Q9BXS0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms