Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.19■□□□□ 0.66
TIMP4Q99727 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.19■□□□□ 0.66
TIMP4Q99727 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.19■□□□□ 0.66
TIMP4Q99727 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIMP4Q99727 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP4Q99727 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP4Q99727 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP4Q99727 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP4Q99727 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TIMP4Q99727 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP4Q99727 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP4Q99727 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP4Q99727 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP4Q99727 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.18■□□□□ 0.66
TIMP4Q99727 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
TIMP4Q99727 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMP4Q99727 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.18■□□□□ 0.66
TIMP4Q99727 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMP4Q99727 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TIMP4Q99727 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP4Q99727 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.17■□□□□ 0.66
TIMP4Q99727 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP4Q99727 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.17■□□□□ 0.66
TIMP4Q99727 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP4Q99727 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP4Q99727 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP4Q99727 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.17■□□□□ 0.66
TIMP4Q99727 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP4Q99727 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.17■□□□□ 0.66
TIMP4Q99727 RAP2CP1-201ENST00000605103 478 ntBASIC19.17■□□□□ 0.66
TIMP4Q99727 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP4Q99727 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.17■□□□□ 0.66
TIMP4Q99727 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.17■□□□□ 0.66
TIMP4Q99727 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.17■□□□□ 0.66
TIMP4Q99727 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP4Q99727 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP4Q99727 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP4Q99727 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.16■□□□□ 0.66
TIMP4Q99727 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP4Q99727 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.16■□□□□ 0.66
TIMP4Q99727 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.16■□□□□ 0.66
TIMP4Q99727 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.16■□□□□ 0.66
TIMP4Q99727 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TIMP4Q99727 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP4Q99727 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP4Q99727 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP4Q99727 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP4Q99727 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP4Q99727 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP4Q99727 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP4Q99727 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TIMP4Q99727 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP4Q99727 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP4Q99727 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP4Q99727 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP4Q99727 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP4Q99727 AC026185.1-201ENST00000445748 174 ntBASIC19.15■□□□□ 0.66
TIMP4Q99727 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TIMP4Q99727 AC138907.5-202ENST00000569484 235 ntBASIC19.15■□□□□ 0.66
TIMP4Q99727 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.15■□□□□ 0.66
TIMP4Q99727 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP4Q99727 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP4Q99727 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP4Q99727 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
TIMP4Q99727 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TIMP4Q99727 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP4Q99727 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP4Q99727 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.15■□□□□ 0.66
TIMP4Q99727 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TIMP4Q99727 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.14■□□□□ 0.66
TIMP4Q99727 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP4Q99727 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.14■□□□□ 0.65
TIMP4Q99727 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP4Q99727 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.14■□□□□ 0.65
TIMP4Q99727 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP4Q99727 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.14■□□□□ 0.65
TIMP4Q99727 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.14■□□□□ 0.65
TIMP4Q99727 EEF1DP3-203ENST00000566025 782 ntBASIC19.14■□□□□ 0.65
TIMP4Q99727 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.14■□□□□ 0.65
TIMP4Q99727 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP4Q99727 AC053503.5-201ENST00000601508 636 ntBASIC19.14■□□□□ 0.65
TIMP4Q99727 UBE2DNL-204ENST00000602536 740 ntBASIC19.14■□□□□ 0.65
TIMP4Q99727 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.14■□□□□ 0.65
TIMP4Q99727 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP4Q99727 AL157384.1-201ENST00000445995 2473 ntBASIC19.14■□□□□ 0.65
TIMP4Q99727 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP4Q99727 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP4Q99727 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP4Q99727 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP4Q99727 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TIMP4Q99727 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP4Q99727 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMP4Q99727 ID1-201ENST00000376105 1233 ntBASIC19.13■□□□□ 0.65
TIMP4Q99727 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMP4Q99727 AC010141.2-201ENST00000452426 721 ntBASIC19.13■□□□□ 0.65
TIMP4Q99727 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP4Q99727 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMP4Q99727 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.13■□□□□ 0.65
TIMP4Q99727 MFSD11-216ENST00000590393 1141 ntBASIC19.13■□□□□ 0.65
TIMP4Q99727 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms