Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC38A3Q99624 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SLC38A3Q99624 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A3Q99624 AC069152.1-201ENST00000438030 544 ntBASIC20.28■□□□□ 0.84
SLC38A3Q99624 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC38A3Q99624 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SLC38A3Q99624 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC38A3Q99624 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
SLC38A3Q99624 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC38A3Q99624 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A3Q99624 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A3Q99624 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC38A3Q99624 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A3Q99624 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A3Q99624 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SLC38A3Q99624 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A3Q99624 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A3Q99624 GUSBP5-202ENST00000510805 1989 ntBASIC20.27■□□□□ 0.84
SLC38A3Q99624 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A3Q99624 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A3Q99624 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SLC38A3Q99624 AL512625.2-201ENST00000417533 625 ntBASIC20.27■□□□□ 0.84
SLC38A3Q99624 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A3Q99624 AC245052.3-201ENST00000450182 901 ntBASIC20.27■□□□□ 0.84
SLC38A3Q99624 AC093787.1-201ENST00000450396 207 ntBASIC20.27■□□□□ 0.84
SLC38A3Q99624 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC38A3Q99624 CD99P1-205ENST00000527459 561 ntBASIC20.27■□□□□ 0.84
SLC38A3Q99624 AL162412.1-201ENST00000567129 965 ntBASIC20.27■□□□□ 0.84
SLC38A3Q99624 MIR4758-201ENST00000577688 71 ntBASIC20.27■□□□□ 0.84
SLC38A3Q99624 C11orf96-202ENST00000528572 1834 ntBASIC20.27■□□□□ 0.84
SLC38A3Q99624 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC38A3Q99624 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A3Q99624 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A3Q99624 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A3Q99624 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A3Q99624 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLC38A3Q99624 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A3Q99624 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC38A3Q99624 MIPEPP3-201ENST00000412105 444 ntBASIC20.26■□□□□ 0.83
SLC38A3Q99624 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A3Q99624 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A3Q99624 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC38A3Q99624 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC38A3Q99624 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC38A3Q99624 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC38A3Q99624 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC38A3Q99624 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC38A3Q99624 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A3Q99624 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC38A3Q99624 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A3Q99624 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A3Q99624 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC38A3Q99624 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A3Q99624 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SLC38A3Q99624 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC38A3Q99624 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SLC38A3Q99624 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SLC38A3Q99624 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC38A3Q99624 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC38A3Q99624 KRT18P6-201ENST00000555540 1265 ntBASIC20.25■□□□□ 0.83
SLC38A3Q99624 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SLC38A3Q99624 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 AC068473.5-201ENST00000616428 2072 ntBASIC20.25■□□□□ 0.83
SLC38A3Q99624 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A3Q99624 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A3Q99624 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SLC38A3Q99624 AC073210.2-201ENST00000430369 194 ntBASIC20.24■□□□□ 0.83
SLC38A3Q99624 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.24■□□□□ 0.83
SLC38A3Q99624 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC38A3Q99624 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC38A3Q99624 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A3Q99624 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A3Q99624 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC38A3Q99624 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC38A3Q99624 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC38A3Q99624 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC38A3Q99624 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC38A3Q99624 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC38A3Q99624 RARRES2P4-201ENST00000514074 484 ntBASIC20.23■□□□□ 0.83
SLC38A3Q99624 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC38A3Q99624 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC38A3Q99624 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.23■□□□□ 0.83
SLC38A3Q99624 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC38A3Q99624 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC38A3Q99624 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC38A3Q99624 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC38A3Q99624 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC38A3Q99624 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC38A3Q99624 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SLC38A3Q99624 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms