Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 DUX4L9-201ENST00000449051 1259 ntBASIC19.67■□□□□ 0.74
NR1H4Q96RI1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 MIR6765-201ENST00000614092 87 ntBASIC19.67■□□□□ 0.74
NR1H4Q96RI1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NR1H4Q96RI1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 HSD17B1P1-201ENST00000590052 955 ntBASIC19.65■□□□□ 0.74
NR1H4Q96RI1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H4Q96RI1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NR1H4Q96RI1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.64■□□□□ 0.74
NR1H4Q96RI1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
NR1H4Q96RI1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 U85056.1-201ENST00000616429 682 ntBASIC19.64■□□□□ 0.73
NR1H4Q96RI1 AC009086.3-201ENST00000623486 1008 ntBASIC19.64■□□□□ 0.73
NR1H4Q96RI1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NR1H4Q96RI1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 AC087393.1-201ENST00000582896 145 ntBASIC19.63■□□□□ 0.73
NR1H4Q96RI1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H4Q96RI1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
NR1H4Q96RI1 AC005082.1-201ENST00000413042 2259 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms