Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.69■□□□□ 0.74
COL21A1Q96P44 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL21A1Q96P44 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL21A1Q96P44 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL21A1Q96P44 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.69■□□□□ 0.74
COL21A1Q96P44 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.69■□□□□ 0.74
COL21A1Q96P44 AC097381.1-201ENST00000429019 1296 ntBASIC19.69■□□□□ 0.74
COL21A1Q96P44 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COL21A1Q96P44 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.69■□□□□ 0.74
COL21A1Q96P44 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL21A1Q96P44 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.69■□□□□ 0.74
COL21A1Q96P44 AP006587.3-201ENST00000525742 1516 ntBASIC19.69■□□□□ 0.74
COL21A1Q96P44 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL21A1Q96P44 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL21A1Q96P44 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL21A1Q96P44 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.69■□□□□ 0.74
COL21A1Q96P44 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL21A1Q96P44 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL21A1Q96P44 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL21A1Q96P44 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL21A1Q96P44 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL21A1Q96P44 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL21A1Q96P44 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL21A1Q96P44 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 RARRES2P6-201ENST00000567333 442 ntBASIC19.68■□□□□ 0.74
COL21A1Q96P44 MIR6821-201ENST00000617625 74 ntBASIC19.68■□□□□ 0.74
COL21A1Q96P44 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL21A1Q96P44 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COL21A1Q96P44 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL21A1Q96P44 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL21A1Q96P44 AC092667.1-201ENST00000434301 2586 ntBASIC19.68■□□□□ 0.74
COL21A1Q96P44 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL21A1Q96P44 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.67■□□□□ 0.74
COL21A1Q96P44 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COL21A1Q96P44 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL21A1Q96P44 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL21A1Q96P44 MIR935-201ENST00000401179 91 ntBASIC19.67■□□□□ 0.74
COL21A1Q96P44 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.67■□□□□ 0.74
COL21A1Q96P44 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL21A1Q96P44 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 AC055733.4-201ENST00000638462 1354 ntBASIC19.67■□□□□ 0.74
COL21A1Q96P44 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.67■□□□□ 0.74
COL21A1Q96P44 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.67■□□□□ 0.74
COL21A1Q96P44 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL21A1Q96P44 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COL21A1Q96P44 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL21A1Q96P44 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
COL21A1Q96P44 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.66■□□□□ 0.74
COL21A1Q96P44 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.66■□□□□ 0.74
COL21A1Q96P44 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.66■□□□□ 0.74
COL21A1Q96P44 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL21A1Q96P44 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
COL21A1Q96P44 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.66■□□□□ 0.74
COL21A1Q96P44 CCDC92B-201ENST00000575506 885 ntBASIC19.66■□□□□ 0.74
COL21A1Q96P44 TERF1P2-201ENST00000583350 1212 ntBASIC19.66■□□□□ 0.74
COL21A1Q96P44 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.66■□□□□ 0.74
COL21A1Q96P44 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL21A1Q96P44 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.66■□□□□ 0.74
COL21A1Q96P44 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL21A1Q96P44 LINC01521-201ENST00000504184 1943 ntBASIC19.66■□□□□ 0.74
COL21A1Q96P44 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL21A1Q96P44 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL21A1Q96P44 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL21A1Q96P44 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.65■□□□□ 0.74
COL21A1Q96P44 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.65■□□□□ 0.74
COL21A1Q96P44 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.65■□□□□ 0.74
COL21A1Q96P44 AC026271.2-201ENST00000428091 497 ntBASIC19.65■□□□□ 0.74
COL21A1Q96P44 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.65■□□□□ 0.74
COL21A1Q96P44 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL21A1Q96P44 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.65■□□□□ 0.74
COL21A1Q96P44 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.65■□□□□ 0.74
COL21A1Q96P44 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.65■□□□□ 0.74
COL21A1Q96P44 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.65■□□□□ 0.74
COL21A1Q96P44 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms