Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNRNP40Q96DI7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 AL589743.5-201ENST00000616611 1050 ntBASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRNP40Q96DI7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 KRT17P3-201ENST00000420566 1262 ntBASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 PNMA6B-201ENST00000538162 1200 ntBASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 MIR4497-201ENST00000583208 89 ntBASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP40Q96DI7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 MCRIP2P1-201ENST00000394346 511 ntBASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 AC245052.3-201ENST00000450182 901 ntBASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 AC092368.3-202ENST00000574180 1591 ntBASIC18.85■□□□□ 0.61
SNRNP40Q96DI7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
SNRNP40Q96DI7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.83■□□□□ 0.61
SNRNP40Q96DI7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
SNRNP40Q96DI7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
SNRNP40Q96DI7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNRNP40Q96DI7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
SNRNP40Q96DI7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNRNP40Q96DI7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 RN7SL471P-201ENST00000580476 299 ntBASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRNP40Q96DI7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms