Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB3Q92617 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB3Q92617 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB3Q92617 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB3Q92617 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB3Q92617 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NPIPB3Q92617 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB3Q92617 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NPIPB3Q92617 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.46■□□□□ 0.22
NPIPB3Q92617 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPB3Q92617 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPB3Q92617 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPB3Q92617 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPB3Q92617 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB3Q92617 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
NPIPB3Q92617 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPB3Q92617 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NPIPB3Q92617 AC006128.1-201ENST00000624704 1661 ntBASIC16.44■□□□□ 0.22
NPIPB3Q92617 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPB3Q92617 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.44■□□□□ 0.22
NPIPB3Q92617 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPB3Q92617 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.44■□□□□ 0.22
NPIPB3Q92617 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPB3Q92617 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPB3Q92617 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.44■□□□□ 0.22
NPIPB3Q92617 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.44■□□□□ 0.22
NPIPB3Q92617 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPB3Q92617 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.44■□□□□ 0.22
NPIPB3Q92617 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPB3Q92617 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPB3Q92617 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.44■□□□□ 0.22
NPIPB3Q92617 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPB3Q92617 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPB3Q92617 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.44■□□□□ 0.22
NPIPB3Q92617 AC009237.3-201ENST00000393279 1427 ntBASIC16.44■□□□□ 0.22
NPIPB3Q92617 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPB3Q92617 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.43■□□□□ 0.22
NPIPB3Q92617 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPB3Q92617 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.43■□□□□ 0.22
NPIPB3Q92617 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPB3Q92617 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NPIPB3Q92617 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPB3Q92617 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPB3Q92617 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPB3Q92617 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.43■□□□□ 0.22
NPIPB3Q92617 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPB3Q92617 AC024257.2-201ENST00000549699 147 ntBASIC16.43■□□□□ 0.22
NPIPB3Q92617 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.43■□□□□ 0.22
NPIPB3Q92617 AL136162.1-201ENST00000607711 1078 ntBASIC16.43■□□□□ 0.22
NPIPB3Q92617 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPB3Q92617 PLK5-205ENST00000642079 1969 ntBASIC16.43■□□□□ 0.22
NPIPB3Q92617 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NPIPB3Q92617 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPB3Q92617 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.43■□□□□ 0.22
NPIPB3Q92617 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NPIPB3Q92617 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.42■□□□□ 0.22
NPIPB3Q92617 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.42■□□□□ 0.22
NPIPB3Q92617 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NPIPB3Q92617 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.42■□□□□ 0.22
NPIPB3Q92617 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 IGHV3-19-201ENST00000521488 291 ntBASIC16.42■□□□□ 0.22
NPIPB3Q92617 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.42■□□□□ 0.22
NPIPB3Q92617 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NPIPB3Q92617 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms