Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FNDC9Q8TBE3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC9Q8TBE3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC9Q8TBE3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC9Q8TBE3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
FNDC9Q8TBE3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC9Q8TBE3 C11orf96-202ENST00000528572 1834 ntBASIC18.81■□□□□ 0.6
FNDC9Q8TBE3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC9Q8TBE3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 AC010536.3-201ENST00000620306 533 ntBASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.8■□□□□ 0.6
FNDC9Q8TBE3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 SLC7A5P1-201ENST00000568957 537 ntBASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC9Q8TBE3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC9Q8TBE3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 KRT16P2-201ENST00000414673 1423 ntBASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 CROCCP5-201ENST00000436658 830 ntBASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 AC006970.2-201ENST00000450065 779 ntBASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 AC231657.2-201ENST00000624556 255 ntBASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC9Q8TBE3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms