Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.89■■□□□ 1.58
NKX2-3Q8TAU0 AL138781.1-201ENST00000566567 1274 ntBASIC24.89■■□□□ 1.58
NKX2-3Q8TAU0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.89■■□□□ 1.58
NKX2-3Q8TAU0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
NKX2-3Q8TAU0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.89■■□□□ 1.58
NKX2-3Q8TAU0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.89■■□□□ 1.57
NKX2-3Q8TAU0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.89■■□□□ 1.57
NKX2-3Q8TAU0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NKX2-3Q8TAU0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 AC007375.3-201ENST00000600936 2314 ntBASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 AC007322.1-201ENST00000426983 750 ntBASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NKX2-3Q8TAU0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 AC073210.2-201ENST00000430369 194 ntBASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NKX2-3Q8TAU0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 AC244015.2-201ENST00000616358 1861 ntBASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 AC005181.1-201ENST00000604782 1256 ntBASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 ITM2C-210ENST00000620962 501 ntBASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NKX2-3Q8TAU0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
NKX2-3Q8TAU0 AC026310.3-201ENST00000625186 2373 ntBASIC24.85■■□□□ 1.57
NKX2-3Q8TAU0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.85■■□□□ 1.57
NKX2-3Q8TAU0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.85■■□□□ 1.57
NKX2-3Q8TAU0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NKX2-3Q8TAU0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.85■■□□□ 1.57
NKX2-3Q8TAU0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 Z98882.1-201ENST00000622160 2253 ntBASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 KRT18P29-201ENST00000397031 1267 ntBASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 POU5F1P3-201ENST00000428824 1078 ntBASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 AF106564.1-201ENST00000607058 2553 ntBASIC24.84■■□□□ 1.57
NKX2-3Q8TAU0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
NKX2-3Q8TAU0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
NKX2-3Q8TAU0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.83■■□□□ 1.57
NKX2-3Q8TAU0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
NKX2-3Q8TAU0 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.83■■□□□ 1.57
NKX2-3Q8TAU0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.83■■□□□ 1.57
NKX2-3Q8TAU0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
NKX2-3Q8TAU0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NKX2-3Q8TAU0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
NKX2-3Q8TAU0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NKX2-3Q8TAU0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
NKX2-3Q8TAU0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
NKX2-3Q8TAU0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
NKX2-3Q8TAU0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.82■■□□□ 1.56
NKX2-3Q8TAU0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NKX2-3Q8TAU0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.82■■□□□ 1.56
NKX2-3Q8TAU0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms