Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC11.91□□□□□ -0.5
HMCN2Q8NDA2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC11.91□□□□□ -0.5
HMCN2Q8NDA2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
HMCN2Q8NDA2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HMCN2Q8NDA2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HMCN2Q8NDA2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HMCN2Q8NDA2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HMCN2Q8NDA2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.91□□□□□ -0.5
HMCN2Q8NDA2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.91□□□□□ -0.5
HMCN2Q8NDA2 REXO1L10P-201ENST00000615707 1290 ntBASIC11.91□□□□□ -0.5
HMCN2Q8NDA2 AC145676.1-201ENST00000514988 2004 ntBASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 KRASP1-201ENST00000407852 552 ntBASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 FITM1-202ENST00000559294 800 ntBASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
HMCN2Q8NDA2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC11.9□□□□□ -0.51
HMCN2Q8NDA2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
HMCN2Q8NDA2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
HMCN2Q8NDA2 AL031133.1-201ENST00000406807 723 ntBASIC11.9□□□□□ -0.51
HMCN2Q8NDA2 FAM8A6P-201ENST00000407496 1135 ntBASIC11.9□□□□□ -0.51
HMCN2Q8NDA2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC11.9□□□□□ -0.51
HMCN2Q8NDA2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
HMCN2Q8NDA2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 AC079630.1-202ENST00000618127 1840 ntBASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HMCN2Q8NDA2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 AC053503.5-201ENST00000601508 636 ntBASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 AP000593.1-201ENST00000393668 712 ntBASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HMCN2Q8NDA2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC11.87□□□□□ -0.51
HMCN2Q8NDA2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC11.87□□□□□ -0.51
HMCN2Q8NDA2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HMCN2Q8NDA2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC11.87□□□□□ -0.51
HMCN2Q8NDA2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.87□□□□□ -0.51
HMCN2Q8NDA2 AC105020.6-201ENST00000621523 1217 ntBASIC11.87□□□□□ -0.51
HMCN2Q8NDA2 AP000550.4-202ENST00000639755 178 ntBASIC11.87□□□□□ -0.51
HMCN2Q8NDA2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC11.87□□□□□ -0.51
HMCN2Q8NDA2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms