Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC197Q8NCU1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC197Q8NCU1 AC005703.6-201ENST00000623265 1329 ntBASIC20.76■□□□□ 0.91
CCDC197Q8NCU1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC197Q8NCU1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC197Q8NCU1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 AC116562.4-201ENST00000641316 2276 ntBASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC197Q8NCU1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC197Q8NCU1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC197Q8NCU1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC197Q8NCU1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC197Q8NCU1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC197Q8NCU1 AL512408.1-201ENST00000569378 2000 ntBASIC20.74■□□□□ 0.91
CCDC197Q8NCU1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CCDC197Q8NCU1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC197Q8NCU1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC197Q8NCU1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC197Q8NCU1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC197Q8NCU1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 AC007225.1-201ENST00000566331 1836 ntBASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC197Q8NCU1 AC099778.1-201ENST00000568593 1911 ntBASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC197Q8NCU1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC197Q8NCU1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC197Q8NCU1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 AL031602.1-201ENST00000633169 911 ntBASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC197Q8NCU1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms