Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC89Q8N998 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC89Q8N998 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.64■■□□□ 1.06
CCDC89Q8N998 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CCDC89Q8N998 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC89Q8N998 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC89Q8N998 AC099791.1-201ENST00000416440 715 ntBASIC21.64■■□□□ 1.05
CCDC89Q8N998 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC89Q8N998 AC027682.1-201ENST00000562846 899 ntBASIC21.64■■□□□ 1.05
CCDC89Q8N998 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC89Q8N998 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC89Q8N998 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC89Q8N998 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.64■■□□□ 1.05
CCDC89Q8N998 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC89Q8N998 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC89Q8N998 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
CCDC89Q8N998 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC89Q8N998 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CCDC89Q8N998 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC89Q8N998 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC89Q8N998 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC89Q8N998 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC89Q8N998 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC89Q8N998 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC89Q8N998 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC89Q8N998 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC89Q8N998 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC89Q8N998 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC89Q8N998 AC096631.2-201ENST00000436136 790 ntBASIC21.63■■□□□ 1.05
CCDC89Q8N998 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC89Q8N998 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC89Q8N998 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC89Q8N998 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC89Q8N998 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC89Q8N998 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCDC89Q8N998 AC006128.1-201ENST00000624704 1661 ntBASIC21.63■■□□□ 1.05
CCDC89Q8N998 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC89Q8N998 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC89Q8N998 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC89Q8N998 TSPY26P-201ENST00000476365 1326 ntBASIC21.62■■□□□ 1.05
CCDC89Q8N998 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC89Q8N998 PBX2P1-201ENST00000493219 1291 ntBASIC21.62■■□□□ 1.05
CCDC89Q8N998 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC89Q8N998 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC89Q8N998 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC89Q8N998 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC89Q8N998 AC105233.4-201ENST00000642045 216 ntBASIC21.62■■□□□ 1.05
CCDC89Q8N998 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCDC89Q8N998 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC89Q8N998 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC89Q8N998 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC89Q8N998 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC89Q8N998 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC89Q8N998 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CCDC89Q8N998 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC89Q8N998 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC89Q8N998 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC89Q8N998 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC89Q8N998 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC89Q8N998 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC89Q8N998 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC89Q8N998 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC89Q8N998 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC89Q8N998 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC89Q8N998 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.61■■□□□ 1.05
CCDC89Q8N998 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CCDC89Q8N998 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC89Q8N998 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC89Q8N998 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC89Q8N998 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC89Q8N998 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC89Q8N998 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC89Q8N998 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC89Q8N998 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC89Q8N998 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC89Q8N998 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC89Q8N998 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC89Q8N998 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC89Q8N998 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC89Q8N998 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC89Q8N998 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC89Q8N998 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC89Q8N998 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC89Q8N998 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC89Q8N998 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CCDC89Q8N998 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CCDC89Q8N998 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC89Q8N998 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC89Q8N998 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC89Q8N998 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC89Q8N998 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC89Q8N998 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC89Q8N998 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC89Q8N998 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CCDC89Q8N998 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC89Q8N998 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCDC89Q8N998 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
CCDC89Q8N998 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CCDC89Q8N998 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC89Q8N998 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms