Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC43Q8N309 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC43Q8N309 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC43Q8N309 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC43Q8N309 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 AC245052.3-201ENST00000450182 901 ntBASIC22.56■■□□□ 1.2
LRRC43Q8N309 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC43Q8N309 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC43Q8N309 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LRRC43Q8N309 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRC43Q8N309 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 LSM12P1-201ENST00000411836 588 ntBASIC22.55■■□□□ 1.2
LRRC43Q8N309 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 FAM21FP-204ENST00000608637 956 ntBASIC22.55■■□□□ 1.2
LRRC43Q8N309 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRC43Q8N309 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
LRRC43Q8N309 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
LRRC43Q8N309 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRRC43Q8N309 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRC43Q8N309 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRC43Q8N309 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRRC43Q8N309 AC091799.1-201ENST00000422823 811 ntBASIC22.54■■□□□ 1.2
LRRC43Q8N309 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.54■■□□□ 1.2
LRRC43Q8N309 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.54■■□□□ 1.2
LRRC43Q8N309 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.54■■□□□ 1.2
LRRC43Q8N309 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.54■■□□□ 1.2
LRRC43Q8N309 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.54■■□□□ 1.2
LRRC43Q8N309 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
LRRC43Q8N309 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRC43Q8N309 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRC43Q8N309 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC43Q8N309 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.53■■□□□ 1.2
LRRC43Q8N309 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC43Q8N309 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC43Q8N309 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
LRRC43Q8N309 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC43Q8N309 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC43Q8N309 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.53■■□□□ 1.2
LRRC43Q8N309 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC43Q8N309 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.53■■□□□ 1.2
LRRC43Q8N309 CDV3P1-201ENST00000471403 739 ntBASIC22.53■■□□□ 1.2
LRRC43Q8N309 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC43Q8N309 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.53■■□□□ 1.2
LRRC43Q8N309 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.53■■□□□ 1.2
LRRC43Q8N309 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
LRRC43Q8N309 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC43Q8N309 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.53■■□□□ 1.2
LRRC43Q8N309 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.53■■□□□ 1.2
LRRC43Q8N309 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.53■■□□□ 1.2
LRRC43Q8N309 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC43Q8N309 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRC43Q8N309 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRC43Q8N309 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRC43Q8N309 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRC43Q8N309 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRC43Q8N309 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRC43Q8N309 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.52■■□□□ 1.2
LRRC43Q8N309 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRC43Q8N309 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
LRRC43Q8N309 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.52■■□□□ 1.2
LRRC43Q8N309 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.52■■□□□ 1.2
LRRC43Q8N309 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
LRRC43Q8N309 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.52■■□□□ 1.2
LRRC43Q8N309 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.52■■□□□ 1.2
LRRC43Q8N309 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.52■■□□□ 1.2
LRRC43Q8N309 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.52■■□□□ 1.2
LRRC43Q8N309 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRC43Q8N309 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRC43Q8N309 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC43Q8N309 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.51■■□□□ 1.19
LRRC43Q8N309 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC43Q8N309 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC43Q8N309 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC43Q8N309 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC43Q8N309 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC43Q8N309 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.51■■□□□ 1.19
LRRC43Q8N309 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.51■■□□□ 1.19
LRRC43Q8N309 AC098590.1-201ENST00000468126 897 ntBASIC22.51■■□□□ 1.19
LRRC43Q8N309 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.51■■□□□ 1.19
LRRC43Q8N309 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LRRC43Q8N309 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms