Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SCML4Q8N228 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.84■■□□□ 1.09
SCML4Q8N228 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.84■■□□□ 1.09
SCML4Q8N228 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCML4Q8N228 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.84■■□□□ 1.09
SCML4Q8N228 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.83■■□□□ 1.09
SCML4Q8N228 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCML4Q8N228 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCML4Q8N228 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SCML4Q8N228 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.83■■□□□ 1.09
SCML4Q8N228 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCML4Q8N228 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SCML4Q8N228 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.83■■□□□ 1.09
SCML4Q8N228 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.83■■□□□ 1.09
SCML4Q8N228 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.83■■□□□ 1.09
SCML4Q8N228 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SCML4Q8N228 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SCML4Q8N228 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.82■■□□□ 1.08
SCML4Q8N228 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCML4Q8N228 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.82■■□□□ 1.08
SCML4Q8N228 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCML4Q8N228 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SCML4Q8N228 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCML4Q8N228 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.82■■□□□ 1.08
SCML4Q8N228 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SCML4Q8N228 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCML4Q8N228 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SCML4Q8N228 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SCML4Q8N228 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCML4Q8N228 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SCML4Q8N228 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCML4Q8N228 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCML4Q8N228 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SCML4Q8N228 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCML4Q8N228 AC068338.2-201ENST00000563278 1430 ntBASIC21.81■■□□□ 1.08
SCML4Q8N228 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.81■■□□□ 1.08
SCML4Q8N228 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SCML4Q8N228 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCML4Q8N228 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCML4Q8N228 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.81■■□□□ 1.08
SCML4Q8N228 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.81■■□□□ 1.08
SCML4Q8N228 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SCML4Q8N228 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.81■■□□□ 1.08
SCML4Q8N228 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCML4Q8N228 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.81■■□□□ 1.08
SCML4Q8N228 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SCML4Q8N228 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCML4Q8N228 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SCML4Q8N228 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.8■■□□□ 1.08
SCML4Q8N228 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.8■■□□□ 1.08
SCML4Q8N228 AC090192.1-201ENST00000517740 490 ntBASIC21.8■■□□□ 1.08
SCML4Q8N228 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.8■■□□□ 1.08
SCML4Q8N228 AL591742.1-201ENST00000604433 565 ntBASIC21.8■■□□□ 1.08
SCML4Q8N228 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.8■■□□□ 1.08
SCML4Q8N228 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.8■■□□□ 1.08
SCML4Q8N228 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCML4Q8N228 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SCML4Q8N228 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCML4Q8N228 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCML4Q8N228 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCML4Q8N228 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SCML4Q8N228 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCML4Q8N228 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.79■■□□□ 1.08
SCML4Q8N228 CROCCP5-201ENST00000436658 830 ntBASIC21.79■■□□□ 1.08
SCML4Q8N228 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.79■■□□□ 1.08
SCML4Q8N228 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCML4Q8N228 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.79■■□□□ 1.08
SCML4Q8N228 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SCML4Q8N228 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCML4Q8N228 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.78■■□□□ 1.08
SCML4Q8N228 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.78■■□□□ 1.08
SCML4Q8N228 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.78■■□□□ 1.08
SCML4Q8N228 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCML4Q8N228 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCML4Q8N228 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.78■■□□□ 1.08
SCML4Q8N228 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.78■■□□□ 1.08
SCML4Q8N228 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCML4Q8N228 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCML4Q8N228 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCML4Q8N228 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCML4Q8N228 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCML4Q8N228 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCML4Q8N228 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SCML4Q8N228 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.77■■□□□ 1.08
SCML4Q8N228 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.77■■□□□ 1.08
SCML4Q8N228 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.77■■□□□ 1.08
SCML4Q8N228 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
SCML4Q8N228 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms