Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC29.39■■■□□ 2.3
XRN1Q8IZH2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC29.39■■■□□ 2.3
XRN1Q8IZH2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC29.39■■■□□ 2.29
XRN1Q8IZH2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 MAX-217ENST00000557277 728 ntTSL 3 BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
XRN1Q8IZH2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
XRN1Q8IZH2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
XRN1Q8IZH2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
XRN1Q8IZH2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC29.37■■■□□ 2.29
XRN1Q8IZH2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
XRN1Q8IZH2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
XRN1Q8IZH2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
XRN1Q8IZH2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC29.37■■■□□ 2.29
XRN1Q8IZH2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC29.37■■■□□ 2.29
XRN1Q8IZH2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
XRN1Q8IZH2 AC007322.3-201ENST00000426526 701 ntBASIC29.37■■■□□ 2.29
XRN1Q8IZH2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
XRN1Q8IZH2 AC233702.5-201ENST00000584107 538 ntBASIC29.37■■■□□ 2.29
XRN1Q8IZH2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
XRN1Q8IZH2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC29.35■■■□□ 2.29
XRN1Q8IZH2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC29.35■■■□□ 2.29
XRN1Q8IZH2 CYP21A1P-202ENST00000354927 1481 ntBASIC29.35■■■□□ 2.29
XRN1Q8IZH2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC29.35■■■□□ 2.29
XRN1Q8IZH2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC29.35■■■□□ 2.29
XRN1Q8IZH2 NFE2L3P1-201ENST00000588207 1959 ntBASIC29.35■■■□□ 2.29
XRN1Q8IZH2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
XRN1Q8IZH2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC29.35■■■□□ 2.29
XRN1Q8IZH2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC29.34■■■□□ 2.29
XRN1Q8IZH2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC29.34■■■□□ 2.29
XRN1Q8IZH2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC29.34■■■□□ 2.29
XRN1Q8IZH2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC29.34■■■□□ 2.29
XRN1Q8IZH2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
XRN1Q8IZH2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
XRN1Q8IZH2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC29.34■■■□□ 2.29
XRN1Q8IZH2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC29.34■■■□□ 2.29
XRN1Q8IZH2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
XRN1Q8IZH2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 AC211429.1-201ENST00000415277 523 ntBASIC29.33■■■□□ 2.29
XRN1Q8IZH2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC29.33■■■□□ 2.29
XRN1Q8IZH2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 C11orf96-202ENST00000528572 1834 ntBASIC29.32■■■□□ 2.28
XRN1Q8IZH2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
XRN1Q8IZH2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 TSPY7P-201ENST00000431358 1114 ntBASIC29.31■■■□□ 2.28
XRN1Q8IZH2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms