Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 CROCCP5-201ENST00000436658 830 ntBASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 KRT16P2-201ENST00000414673 1423 ntBASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 AC005181.1-201ENST00000604782 1256 ntBASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 AC013268.1-206ENST00000638368 961 ntBASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 AC112229.1-201ENST00000639295 961 ntBASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM48Q8IWZ4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 AC061975.6-201ENST00000579045 1553 ntBASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 TERF1P5-201ENST00000477545 1207 ntBASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 AL117328.2-201ENST00000624617 1940 ntBASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
TRIM48Q8IWZ4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 HLA-L-209ENST00000420110 1011 ntBASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM48Q8IWZ4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM48Q8IWZ4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 LINC00565-201ENST00000562710 2331 ntBASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRIM48Q8IWZ4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms