Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AL354811.1-201ENST00000610286 706 ntBASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LINC00346Q8IVM7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 TPRG1LP1-201ENST00000598702 760 ntBASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LINC00346Q8IVM7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LINC00346Q8IVM7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 AL358852.1-201ENST00000623174 1268 ntBASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LINC00346Q8IVM7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.44■□□□□ 0.54
LINC00346Q8IVM7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 IRS3P-201ENST00000223076 1006 ntBASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00346Q8IVM7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms