Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB43Q86YS6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
RAB43Q86YS6 AC013268.1-206ENST00000638368 961 ntBASIC19.87■□□□□ 0.77
RAB43Q86YS6 AC112229.1-201ENST00000639295 961 ntBASIC19.87■□□□□ 0.77
RAB43Q86YS6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.87■□□□□ 0.77
RAB43Q86YS6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB43Q86YS6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB43Q86YS6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
RAB43Q86YS6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB43Q86YS6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB43Q86YS6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB43Q86YS6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB43Q86YS6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB43Q86YS6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB43Q86YS6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB43Q86YS6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB43Q86YS6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RAB43Q86YS6 TSPY6P-201ENST00000448518 926 ntBASIC19.86■□□□□ 0.77
RAB43Q86YS6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB43Q86YS6 AC008175.2-201ENST00000612840 297 ntBASIC19.86■□□□□ 0.77
RAB43Q86YS6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB43Q86YS6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RAB43Q86YS6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB43Q86YS6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB43Q86YS6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB43Q86YS6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB43Q86YS6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RAB43Q86YS6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB43Q86YS6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB43Q86YS6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB43Q86YS6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB43Q86YS6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RAB43Q86YS6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB43Q86YS6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
RAB43Q86YS6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB43Q86YS6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB43Q86YS6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RAB43Q86YS6 AF201337.1-201ENST00000520239 748 ntBASIC19.85■□□□□ 0.77
RAB43Q86YS6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.85■□□□□ 0.77
RAB43Q86YS6 AC142086.2-201ENST00000569753 217 ntBASIC19.85■□□□□ 0.77
RAB43Q86YS6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB43Q86YS6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.85■□□□□ 0.77
RAB43Q86YS6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB43Q86YS6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.85■□□□□ 0.77
RAB43Q86YS6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB43Q86YS6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB43Q86YS6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB43Q86YS6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB43Q86YS6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB43Q86YS6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB43Q86YS6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB43Q86YS6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.84■□□□□ 0.77
RAB43Q86YS6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB43Q86YS6 CNN2P6-201ENST00000439038 900 ntBASIC19.84■□□□□ 0.77
RAB43Q86YS6 SLC7A5P2-201ENST00000553010 536 ntBASIC19.84■□□□□ 0.77
RAB43Q86YS6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB43Q86YS6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.84■□□□□ 0.77
RAB43Q86YS6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB43Q86YS6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB43Q86YS6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB43Q86YS6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.84■□□□□ 0.77
RAB43Q86YS6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RAB43Q86YS6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB43Q86YS6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB43Q86YS6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAB43Q86YS6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB43Q86YS6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB43Q86YS6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB43Q86YS6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.83■□□□□ 0.77
RAB43Q86YS6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB43Q86YS6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB43Q86YS6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB43Q86YS6 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB43Q86YS6 TERF1P5-201ENST00000477545 1207 ntBASIC19.83■□□□□ 0.77
RAB43Q86YS6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB43Q86YS6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB43Q86YS6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB43Q86YS6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RAB43Q86YS6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB43Q86YS6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB43Q86YS6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB43Q86YS6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB43Q86YS6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RAB43Q86YS6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB43Q86YS6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB43Q86YS6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RAB43Q86YS6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB43Q86YS6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB43Q86YS6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms