Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NFE4Q86UQ8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NFE4Q86UQ8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.89□□□□□ -0.03
NFE4Q86UQ8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NFE4Q86UQ8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 OR2I1P-207ENST00000453522 948 ntBASIC14.88□□□□□ -0.03
NFE4Q86UQ8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFE4Q86UQ8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 OXCT2P1-201ENST00000447263 1535 ntBASIC14.87□□□□□ -0.03
NFE4Q86UQ8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFE4Q86UQ8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 RARRES2P6-201ENST00000567333 442 ntBASIC14.86□□□□□ -0.03
NFE4Q86UQ8 MIR5787-201ENST00000611784 55 ntBASIC14.86□□□□□ -0.03
NFE4Q86UQ8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFE4Q86UQ8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 SLC47A1P1-202ENST00000449666 945 ntBASIC14.85□□□□□ -0.03
NFE4Q86UQ8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.85□□□□□ -0.03
NFE4Q86UQ8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms