Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 AC003102.1-202ENST00000563394 1796 ntBASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VPS13BQ7Z7G8 C1orf229-201ENST00000623686 2258 ntBASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 AC012618.2-201ENST00000428058 849 ntBASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 FAM197Y4-202ENST00000622692 608 ntBASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VPS13BQ7Z7G8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 HLA-B-256ENST00000639848 1089 ntBASIC13□□□□□ -0.33
VPS13BQ7Z7G8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VPS13BQ7Z7G8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 RN7SL850P-201ENST00000579959 291 ntBASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 C2orf69P4-201ENST00000565394 541 ntBASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13BQ7Z7G8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 268.6 ms