Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
YTHDF3Q7Z739 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
YTHDF3Q7Z739 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
YTHDF3Q7Z739 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 AC004448.1-201ENST00000458332 883 ntBASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 AL512408.1-201ENST00000569378 2000 ntBASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YTHDF3Q7Z739 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.72■□□□□ 0.91
YTHDF3Q7Z739 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YTHDF3Q7Z739 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
YTHDF3Q7Z739 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YTHDF3Q7Z739 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.71■□□□□ 0.91
YTHDF3Q7Z739 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
YTHDF3Q7Z739 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YTHDF3Q7Z739 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
YTHDF3Q7Z739 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
YTHDF3Q7Z739 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YTHDF3Q7Z739 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
YTHDF3Q7Z739 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YTHDF3Q7Z739 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.91
YTHDF3Q7Z739 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.7■□□□□ 0.91
YTHDF3Q7Z739 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 AC087393.1-201ENST00000582896 145 ntBASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
YTHDF3Q7Z739 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 AC239859.2-201ENST00000444165 318 ntBASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms