Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHFQ7M4L6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SHFQ7M4L6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.83■□□□□ 0.61
SHFQ7M4L6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SHFQ7M4L6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHFQ7M4L6 AC006128.1-201ENST00000624704 1661 ntBASIC18.83■□□□□ 0.61
SHFQ7M4L6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHFQ7M4L6 AC131281.2-201ENST00000520478 145 ntBASIC18.83■□□□□ 0.6
SHFQ7M4L6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.83■□□□□ 0.6
SHFQ7M4L6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SHFQ7M4L6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHFQ7M4L6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHFQ7M4L6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SHFQ7M4L6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHFQ7M4L6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHFQ7M4L6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
SHFQ7M4L6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHFQ7M4L6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.83■□□□□ 0.6
SHFQ7M4L6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHFQ7M4L6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHFQ7M4L6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHFQ7M4L6 AP005212.1-201ENST00000581547 1997 ntBASIC18.82■□□□□ 0.6
SHFQ7M4L6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHFQ7M4L6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SHFQ7M4L6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHFQ7M4L6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHFQ7M4L6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SHFQ7M4L6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SHFQ7M4L6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHFQ7M4L6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHFQ7M4L6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHFQ7M4L6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SHFQ7M4L6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHFQ7M4L6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.82■□□□□ 0.6
SHFQ7M4L6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
SHFQ7M4L6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHFQ7M4L6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHFQ7M4L6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHFQ7M4L6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHFQ7M4L6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHFQ7M4L6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHFQ7M4L6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.81■□□□□ 0.6
SHFQ7M4L6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.81■□□□□ 0.6
SHFQ7M4L6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.81■□□□□ 0.6
SHFQ7M4L6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.81■□□□□ 0.6
SHFQ7M4L6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.81■□□□□ 0.6
SHFQ7M4L6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SHFQ7M4L6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHFQ7M4L6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SHFQ7M4L6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHFQ7M4L6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.81■□□□□ 0.6
SHFQ7M4L6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHFQ7M4L6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHFQ7M4L6 GABARAPL3-202ENST00000624044 1851 ntBASIC18.81■□□□□ 0.6
SHFQ7M4L6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SHFQ7M4L6 AFG3L1P-217ENST00000557444 2447 ntBASIC18.81■□□□□ 0.6
SHFQ7M4L6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SHFQ7M4L6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SHFQ7M4L6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHFQ7M4L6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHFQ7M4L6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHFQ7M4L6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.8■□□□□ 0.6
SHFQ7M4L6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHFQ7M4L6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.8■□□□□ 0.6
SHFQ7M4L6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHFQ7M4L6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.8■□□□□ 0.6
SHFQ7M4L6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SHFQ7M4L6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.8■□□□□ 0.6
SHFQ7M4L6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.8■□□□□ 0.6
SHFQ7M4L6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.8■□□□□ 0.6
SHFQ7M4L6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHFQ7M4L6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHFQ7M4L6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHFQ7M4L6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SHFQ7M4L6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHFQ7M4L6 AP006587.3-201ENST00000525742 1516 ntBASIC18.79■□□□□ 0.6
SHFQ7M4L6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.79■□□□□ 0.6
SHFQ7M4L6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.79■□□□□ 0.6
SHFQ7M4L6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SHFQ7M4L6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SHFQ7M4L6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.79■□□□□ 0.6
SHFQ7M4L6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.79■□□□□ 0.6
SHFQ7M4L6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.79■□□□□ 0.6
SHFQ7M4L6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
SHFQ7M4L6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SHFQ7M4L6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHFQ7M4L6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms