Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.85■□□□□ 0.13
CDPF1Q6NVV7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.85■□□□□ 0.13
CDPF1Q6NVV7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDPF1Q6NVV7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDPF1Q6NVV7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 AC099398.1-201ENST00000567919 2776 ntBASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 AC103724.3-201ENST00000564481 992 ntBASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 AL139384.1-201ENST00000612143 3047 ntBASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDPF1Q6NVV7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDPF1Q6NVV7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDPF1Q6NVV7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.83■□□□□ 0.13
CDPF1Q6NVV7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
CDPF1Q6NVV7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDPF1Q6NVV7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDPF1Q6NVV7 AC093503.3-201ENST00000624917 2352 ntBASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDPF1Q6NVV7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 AC022616.5-201ENST00000518796 181 ntBASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 Z92544.1-202ENST00000571933 1220 ntBASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDPF1Q6NVV7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 RPS2P7-201ENST00000447334 885 ntBASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 AC131212.1-201ENST00000613771 668 ntBASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDPF1Q6NVV7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms