Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SWSAP1Q6NVH7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 AC091799.1-201ENST00000422823 811 ntBASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 AC093787.1-201ENST00000450396 207 ntBASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 AC142086.2-201ENST00000569753 217 ntBASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 AC069236.1-201ENST00000604339 616 ntBASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 AC016405.3-201ENST00000607710 860 ntBASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.35■■□□□ 1.33
SWSAP1Q6NVH7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SWSAP1Q6NVH7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SWSAP1Q6NVH7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SWSAP1Q6NVH7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SWSAP1Q6NVH7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.34■■□□□ 1.33
SWSAP1Q6NVH7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.34■■□□□ 1.33
SWSAP1Q6NVH7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SWSAP1Q6NVH7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SWSAP1Q6NVH7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SWSAP1Q6NVH7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 AL162412.1-201ENST00000567129 965 ntBASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.33■■□□□ 1.33
SWSAP1Q6NVH7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SWSAP1Q6NVH7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SWSAP1Q6NVH7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
SWSAP1Q6NVH7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.33■■□□□ 1.32
SWSAP1Q6NVH7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SWSAP1Q6NVH7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SWSAP1Q6NVH7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SWSAP1Q6NVH7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
SWSAP1Q6NVH7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.31■■□□□ 1.32
SWSAP1Q6NVH7 AL512625.2-201ENST00000417533 625 ntBASIC23.31■■□□□ 1.32
SWSAP1Q6NVH7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
SWSAP1Q6NVH7 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.31■■□□□ 1.32
SWSAP1Q6NVH7 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.31■■□□□ 1.32
SWSAP1Q6NVH7 MKRN4P-201ENST00000444706 1521 ntBASIC23.31■■□□□ 1.32
SWSAP1Q6NVH7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.31■■□□□ 1.32
SWSAP1Q6NVH7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SWSAP1Q6NVH7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SWSAP1Q6NVH7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SWSAP1Q6NVH7 RARRES2P4-201ENST00000514074 484 ntBASIC23.3■■□□□ 1.32
SWSAP1Q6NVH7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.3■■□□□ 1.32
SWSAP1Q6NVH7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.3■■□□□ 1.32
SWSAP1Q6NVH7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.3■■□□□ 1.32
SWSAP1Q6NVH7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.3■■□□□ 1.32
SWSAP1Q6NVH7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SWSAP1Q6NVH7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SWSAP1Q6NVH7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SWSAP1Q6NVH7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
SWSAP1Q6NVH7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 FBXW4P1-201ENST00000426721 2239 ntBASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.29■■□□□ 1.32
SWSAP1Q6NVH7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms