Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM53AQ6NSI3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM53AQ6NSI3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM53AQ6NSI3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
FAM53AQ6NSI3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM53AQ6NSI3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
FAM53AQ6NSI3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 IRS3P-201ENST00000223076 1006 ntBASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 AL354811.1-201ENST00000610286 706 ntBASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.3■□□□□ 0.36
FAM53AQ6NSI3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM53AQ6NSI3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 AC019069.1-201ENST00000610008 1333 ntBASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 ZNRF2P3-201ENST00000424200 374 ntBASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 PLK5-205ENST00000642079 1969 ntBASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM53AQ6NSI3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 AL358852.1-201ENST00000623174 1268 ntBASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
FAM53AQ6NSI3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
FAM53AQ6NSI3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FAM53AQ6NSI3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FAM53AQ6NSI3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FAM53AQ6NSI3 AC061975.6-201ENST00000579045 1553 ntBASIC17.27■□□□□ 0.35
FAM53AQ6NSI3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
FAM53AQ6NSI3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.27■□□□□ 0.35
FAM53AQ6NSI3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
FAM53AQ6NSI3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM53AQ6NSI3 AC073130.3-201ENST00000624389 2278 ntBASIC17.26■□□□□ 0.35
FAM53AQ6NSI3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM53AQ6NSI3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
FAM53AQ6NSI3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.26■□□□□ 0.35
FAM53AQ6NSI3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM53AQ6NSI3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FAM53AQ6NSI3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FAM53AQ6NSI3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.26■□□□□ 0.35
FAM53AQ6NSI3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FAM53AQ6NSI3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms