Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FAM78BQ5VT40 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
FAM78BQ5VT40 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
FAM78BQ5VT40 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.52■□□□□ 0.23
FAM78BQ5VT40 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FAM78BQ5VT40 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FAM78BQ5VT40 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FAM78BQ5VT40 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FAM78BQ5VT40 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 AIRN-201ENST00000601203 4374 ntBASIC16.51■□□□□ 0.23
FAM78BQ5VT40 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 AC241377.3-202ENST00000626088 1088 ntBASIC16.51■□□□□ 0.23
FAM78BQ5VT40 AC241585.3-202ENST00000628937 1088 ntBASIC16.51■□□□□ 0.23
FAM78BQ5VT40 AC245100.8-202ENST00000629247 1058 ntBASIC16.51■□□□□ 0.23
FAM78BQ5VT40 AC068587.7-201ENST00000641602 218 ntBASIC16.51■□□□□ 0.23
FAM78BQ5VT40 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM78BQ5VT40 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.5■□□□□ 0.23
FAM78BQ5VT40 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 AL117332.1-201ENST00000622628 974 ntBASIC16.5■□□□□ 0.23
FAM78BQ5VT40 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM78BQ5VT40 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM78BQ5VT40 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM78BQ5VT40 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM78BQ5VT40 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM78BQ5VT40 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FAM78BQ5VT40 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FAM78BQ5VT40 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM78BQ5VT40 AL356740.2-201ENST00000601559 647 ntBASIC16.49■□□□□ 0.23
FAM78BQ5VT40 AC087239.1-201ENST00000622671 572 ntBASIC16.49■□□□□ 0.23
FAM78BQ5VT40 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM78BQ5VT40 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM78BQ5VT40 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FAM78BQ5VT40 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM78BQ5VT40 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FAM78BQ5VT40 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms