Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 AC233263.1-201ENST00000578059 224 ntBASIC20.74■□□□□ 0.91
SF3A2Q15428 LINC00526-201ENST00000581067 1875 ntBASIC20.74■□□□□ 0.91
SF3A2Q15428 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.74■□□□□ 0.91
SF3A2Q15428 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SF3A2Q15428 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.74■□□□□ 0.91
SF3A2Q15428 HLA-B-256ENST00000639848 1089 ntBASIC20.74■□□□□ 0.91
SF3A2Q15428 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SF3A2Q15428 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SF3A2Q15428 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SF3A2Q15428 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SF3A2Q15428 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SF3A2Q15428 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SF3A2Q15428 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SF3A2Q15428 KRT16P2-201ENST00000414673 1423 ntBASIC20.73■□□□□ 0.91
SF3A2Q15428 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SF3A2Q15428 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.73■□□□□ 0.91
SF3A2Q15428 KRT17P3-201ENST00000420566 1262 ntBASIC20.73■□□□□ 0.91
SF3A2Q15428 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.73■□□□□ 0.91
SF3A2Q15428 RN7SL471P-201ENST00000580476 299 ntBASIC20.73■□□□□ 0.91
SF3A2Q15428 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SF3A2Q15428 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.73■□□□□ 0.91
SF3A2Q15428 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SF3A2Q15428 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SF3A2Q15428 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.73■□□□□ 0.91
SF3A2Q15428 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.73■□□□□ 0.91
SF3A2Q15428 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SF3A2Q15428 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.73■□□□□ 0.91
SF3A2Q15428 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SF3A2Q15428 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SF3A2Q15428 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SF3A2Q15428 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.72■□□□□ 0.91
SF3A2Q15428 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SF3A2Q15428 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SF3A2Q15428 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SF3A2Q15428 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SF3A2Q15428 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.72■□□□□ 0.91
SF3A2Q15428 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.72■□□□□ 0.91
SF3A2Q15428 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SF3A2Q15428 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.72■□□□□ 0.91
SF3A2Q15428 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SF3A2Q15428 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SF3A2Q15428 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SF3A2Q15428 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.72■□□□□ 0.91
SF3A2Q15428 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SF3A2Q15428 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SF3A2Q15428 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SF3A2Q15428 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SF3A2Q15428 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SF3A2Q15428 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SF3A2Q15428 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SF3A2Q15428 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SF3A2Q15428 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.71■□□□□ 0.91
SF3A2Q15428 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SF3A2Q15428 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.71■□□□□ 0.91
SF3A2Q15428 AC243732.1-201ENST00000612648 864 ntBASIC20.71■□□□□ 0.91
SF3A2Q15428 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SF3A2Q15428 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SF3A2Q15428 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.71■□□□□ 0.91
SF3A2Q15428 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SF3A2Q15428 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.91
SF3A2Q15428 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SF3A2Q15428 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.7■□□□□ 0.9
SF3A2Q15428 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SF3A2Q15428 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SF3A2Q15428 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SF3A2Q15428 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SF3A2Q15428 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.7■□□□□ 0.9
SF3A2Q15428 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SF3A2Q15428 BX088651.1-201ENST00000540551 451 ntBASIC20.7■□□□□ 0.9
SF3A2Q15428 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.7■□□□□ 0.9
SF3A2Q15428 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SF3A2Q15428 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SF3A2Q15428 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SF3A2Q15428 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.69■□□□□ 0.9
SF3A2Q15428 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SF3A2Q15428 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SF3A2Q15428 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SF3A2Q15428 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SF3A2Q15428 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SF3A2Q15428 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.69■□□□□ 0.9
SF3A2Q15428 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.69■□□□□ 0.9
SF3A2Q15428 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.69■□□□□ 0.9
SF3A2Q15428 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SF3A2Q15428 PNMA6B-201ENST00000538162 1200 ntBASIC20.69■□□□□ 0.9
SF3A2Q15428 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SF3A2Q15428 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.69■□□□□ 0.9
SF3A2Q15428 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.69■□□□□ 0.9
SF3A2Q15428 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SF3A2Q15428 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SF3A2Q15428 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
SF3A2Q15428 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SF3A2Q15428 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SF3A2Q15428 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SF3A2Q15428 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SF3A2Q15428 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.68■□□□□ 0.9
SF3A2Q15428 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.68■□□□□ 0.9
SF3A2Q15428 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SF3A2Q15428 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SF3A2Q15428 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.68■□□□□ 0.9
SF3A2Q15428 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms