Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 AC005837.3-201ENST00000612163 286 ntBASIC13.8□□□□□ -0.2
SYCNQ0VAF6 AL024507.2-201ENST00000606070 2574 ntBASIC13.8□□□□□ -0.2
SYCNQ0VAF6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.79□□□□□ -0.2
SYCNQ0VAF6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 AF106564.1-201ENST00000607058 2553 ntBASIC13.79□□□□□ -0.2
SYCNQ0VAF6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SYCNQ0VAF6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SYCNQ0VAF6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC13.77□□□□□ -0.2
SYCNQ0VAF6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SYCNQ0VAF6 IRS3P-201ENST00000223076 1006 ntBASIC13.77□□□□□ -0.21
SYCNQ0VAF6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SYCNQ0VAF6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 AC105265.2-201ENST00000467189 838 ntBASIC13.76□□□□□ -0.21
SYCNQ0VAF6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SYCNQ0VAF6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms