Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 YGR064WYGR064W 369 nt1.92□□□□□ -2.1
HRD1Q08109 YIL024CYIL024C 570 nt1.92□□□□□ -2.1
HRD1Q08109 YIL156W-AYIL156W-A 402 nt1.92□□□□□ -2.1
HRD1Q08109 PAU23YLR037C 375 nt1.92□□□□□ -2.1
HRD1Q08109 YMR320WYMR320W 306 nt1.92□□□□□ -2.1
HRD1Q08109 YOL114CYOL114C 609 nt1.92□□□□□ -2.1
HRD1Q08109 VAC8YEL013W 1737 nt1.91□□□□□ -2.1
HRD1Q08109 PKP2YGL059W 1476 nt1.91□□□□□ -2.1
HRD1Q08109 YLR108CYLR108C 1458 nt1.91□□□□□ -2.1
HRD1Q08109 YKL075CYKL075C 1353 nt1.91□□□□□ -2.1
HRD1Q08109 CTH1YDR151C 978 nt1.91□□□□□ -2.1
HRD1Q08109 RSR1YGR152C 819 nt1.91□□□□□ -2.1
HRD1Q08109 YJR020WYJR020W 333 nt1.91□□□□□ -2.1
HRD1Q08109 SAW1YAL027W 786 nt1.91□□□□□ -2.1
HRD1Q08109 YAL042C-AYAL042C-A 378 nt1.91□□□□□ -2.1
HRD1Q08109 OMA1YKR087C 1038 nt1.91□□□□□ -2.1
HRD1Q08109 BOS1YLR078C 735 nt1.91□□□□□ -2.1
HRD1Q08109 TPT1YOL102C 693 nt1.91□□□□□ -2.1
HRD1Q08109 MRPL27YBR282W 441 nt1.91□□□□□ -2.1
HRD1Q08109 KAR4YCL055W 1008 nt1.91□□□□□ -2.1
HRD1Q08109 SNU114YKL173W 3027 nt1.91□□□□□ -2.1
HRD1Q08109 UBR2YLR024C 5619 nt1.91□□□□□ -2.1
HRD1Q08109 RPL13AYDL082W 600 nt1.9□□□□□ -2.11
HRD1Q08109 YGL218WYGL218W 651 nt1.9□□□□□ -2.11
HRD1Q08109 YGR204C-AYGR204C-A 114 nt1.9□□□□□ -2.11
HRD1Q08109 RMP1YLR145W 606 nt1.9□□□□□ -2.11
HRD1Q08109 FPR1YNL135C 345 nt1.9□□□□□ -2.11
HRD1Q08109 YOR283WYOR283W 693 nt1.9□□□□□ -2.11
HRD1Q08109 VPS28YPL065W 729 nt1.9□□□□□ -2.11
HRD1Q08109 PBP2YBR233W 1242 nt1.9□□□□□ -2.11
HRD1Q08109 YDR061WYDR061W 1620 nt1.9□□□□□ -2.11
HRD1Q08109 IRC3YDR332W 2070 nt1.9□□□□□ -2.11
HRD1Q08109 RAV1YJR033C 4074 nt1.9□□□□□ -2.11
HRD1Q08109 HOS4YIL112W 3252 nt1.9□□□□□ -2.11
HRD1Q08109 IRC8YJL051W 2469 nt1.9□□□□□ -2.11
HRD1Q08109 YBL005W-AYBL005W-A 1323 nt1.9□□□□□ -2.11
HRD1Q08109 YMR046CYMR046C 1323 nt1.9□□□□□ -2.11
HRD1Q08109 COS111YBR203W 2775 nt1.89□□□□□ -2.11
HRD1Q08109 YGL117WYGL117W 798 nt1.89□□□□□ -2.11
HRD1Q08109 MPC3YGR243W 441 nt1.89□□□□□ -2.11
HRD1Q08109 NOP19YGR251W 591 nt1.89□□□□□ -2.11
HRD1Q08109 YHR071C-AYHR071C-A 321 nt1.89□□□□□ -2.11
HRD1Q08109 IKI1YHR187W 930 nt1.89□□□□□ -2.11
HRD1Q08109 MPH1YIR002C 2982 nt1.89□□□□□ -2.11
HRD1Q08109 YOL050CYOL050C 321 nt1.89□□□□□ -2.11
HRD1Q08109 DSE3YOR264W 1293 nt1.89□□□□□ -2.11
HRD1Q08109 YOR387CYOR387C 621 nt1.89□□□□□ -2.11
HRD1Q08109 SLM4YBR077C 489 nt1.89□□□□□ -2.11
HRD1Q08109 snR43snR43 209 nt1.89□□□□□ -2.11
HRD1Q08109 DNF1YER166W 4716 nt1.89□□□□□ -2.11
HRD1Q08109 SAP190YKR028W 3102 nt1.88□□□□□ -2.11
HRD1Q08109 SPP41YDR464W 4308 nt1.88□□□□□ -2.11
HRD1Q08109 MMS21YEL019C 804 nt1.88□□□□□ -2.11
HRD1Q08109 PRE1YER012W 597 nt1.88□□□□□ -2.11
HRD1Q08109 IRC6YFR043C 714 nt1.88□□□□□ -2.11
HRD1Q08109 UTP30YKR060W 825 nt1.88□□□□□ -2.11
HRD1Q08109 LTP1YPR073C 486 nt1.88□□□□□ -2.11
HRD1Q08109 SIP3YNL257C 3690 nt1.88□□□□□ -2.11
HRD1Q08109 MGM1YOR211C 2646 nt1.87□□□□□ -2.11
HRD1Q08109 YNL193WYNL193W 1677 nt1.87□□□□□ -2.11
HRD1Q08109 CET1YPL228W 1650 nt1.87□□□□□ -2.11
HRD1Q08109 SAP185YJL098W 3177 nt1.87□□□□□ -2.11
HRD1Q08109 SFT1YKL006C-A 294 nt1.87□□□□□ -2.11
HRD1Q08109 YKL162CYKL162C 1209 nt1.87□□□□□ -2.11
HRD1Q08109 SED5YLR026C 1023 nt1.87□□□□□ -2.11
HRD1Q08109 END3YNL084C 1050 nt1.87□□□□□ -2.11
HRD1Q08109 SME1YOR159C 285 nt1.87□□□□□ -2.11
HRD1Q08109 RGL1YPL066W 1440 nt1.87□□□□□ -2.11
HRD1Q08109 TRM2YKR056W 1920 nt1.87□□□□□ -2.11
HRD1Q08109 RRP14YKL082C 1305 nt1.87□□□□□ -2.11
HRD1Q08109 NEO1YIL048W 3456 nt1.86□□□□□ -2.11
HRD1Q08109 TFC3YAL001C 3483 nt1.86□□□□□ -2.11
HRD1Q08109 AVT5YBL089W 1380 nt1.86□□□□□ -2.11
HRD1Q08109 SCP160YJL080C 3669 nt1.86□□□□□ -2.11
HRD1Q08109 MYO2YOR326W 4725 nt1.86□□□□□ -2.11
HRD1Q08109 MED2YDL005C 1296 nt1.86□□□□□ -2.11
HRD1Q08109 NSE3YDR288W 912 nt1.86□□□□□ -2.11
HRD1Q08109 AYR1YIL124W 894 nt1.86□□□□□ -2.11
HRD1Q08109 YJL052C-AYJL052C-A 120 nt1.86□□□□□ -2.11
HRD1Q08109 YLL044WYLL044W 447 nt1.86□□□□□ -2.11
HRD1Q08109 AIM36YMR157C 768 nt1.86□□□□□ -2.11
HRD1Q08109 AGC1YPR021C 2709 nt1.86□□□□□ -2.11
HRD1Q08109 PCK1YKR097W 1650 nt1.86□□□□□ -2.11
HRD1Q08109 BUB1YGR188C 3066 nt1.85□□□□□ -2.11
HRD1Q08109 KAP123YER110C 3342 nt1.85□□□□□ -2.11
HRD1Q08109 snR63snR63 255 nt1.85□□□□□ -2.11
HRD1Q08109 YGL138CYGL138C 1038 nt1.85□□□□□ -2.11
HRD1Q08109 MIG2YGL209W 1149 nt1.85□□□□□ -2.11
HRD1Q08109 YGR114CYGR114C 390 nt1.85□□□□□ -2.11
HRD1Q08109 YIL161WYIL161W 708 nt1.85□□□□□ -2.11
HRD1Q08109 GAB1YLR459W 1185 nt1.85□□□□□ -2.11
HRD1Q08109 TSR4YOL022C 1227 nt1.85□□□□□ -2.11
HRD1Q08109 PAF1YBR279W 1338 nt1.85□□□□□ -2.11
HRD1Q08109 FKS1YLR342W 5631 nt1.84□□□□□ -2.11
HRD1Q08109 BRE1YDL074C 2103 nt1.84□□□□□ -2.11
HRD1Q08109 UFD4YKL010C 4452 nt1.84□□□□□ -2.11
HRD1Q08109 NUP100YKL068W 2880 nt1.84□□□□□ -2.11
HRD1Q08109 GCN2YDR283C 4980 nt1.84□□□□□ -2.11
HRD1Q08109 RRG1YDR065W 1098 nt1.84□□□□□ -2.11
HRD1Q08109 TIF35YDR429C 825 nt1.84□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 17.7 ms