Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 POP7YBR167C 423 nt3.05□□□□□ -1.92
VTA1Q06263 MAK5YBR142W 2322 nt3.05□□□□□ -1.92
VTA1Q06263 RGC1YPR115W 3252 nt3.05□□□□□ -1.92
VTA1Q06263 DIA2YOR080W 2199 nt3.05□□□□□ -1.92
VTA1Q06263 PRP8YHR165C 7242 nt3.05□□□□□ -1.92
VTA1Q06263 MET5YJR137C 4329 nt3.05□□□□□ -1.92
VTA1Q06263 FUS2YMR232W 2034 nt3.04□□□□□ -1.92
VTA1Q06263 MVB12YGR206W 306 nt3.04□□□□□ -1.92
VTA1Q06263 YHL044WYHL044W 708 nt3.04□□□□□ -1.92
VTA1Q06263 YKL091CYKL091C 933 nt3.04□□□□□ -1.92
VTA1Q06263 MRPL16YBL038W 699 nt3.04□□□□□ -1.92
VTA1Q06263 BRX1YOL077C 876 nt3.04□□□□□ -1.92
VTA1Q06263 STE23YLR389C 3084 nt3.04□□□□□ -1.92
VTA1Q06263 CIK1YMR198W 1785 nt3.04□□□□□ -1.92
VTA1Q06263 CDH1YGL003C 1701 nt3.04□□□□□ -1.92
VTA1Q06263 PAM1YDR251W 2493 nt3.03□□□□□ -1.92
VTA1Q06263 STN1YDR082W 1485 nt3.03□□□□□ -1.92
VTA1Q06263 CBP2YHL038C 1893 nt3.03□□□□□ -1.92
VTA1Q06263 RRM3YHR031C 2172 nt3.03□□□□□ -1.92
VTA1Q06263 RIM1YCR028C-A 408 nt3.03□□□□□ -1.92
VTA1Q06263 RSM24YDR175C 960 nt3.03□□□□□ -1.92
VTA1Q06263 YEA4YEL004W 1029 nt3.03□□□□□ -1.92
VTA1Q06263 LOC1YFR001W 615 nt3.03□□□□□ -1.92
VTA1Q06263 EST3YIL009C-A 546 nt3.03□□□□□ -1.92
VTA1Q06263 LSM8YJR022W 330 nt3.03□□□□□ -1.92
VTA1Q06263 SRL3YKR091W 741 nt3.03□□□□□ -1.92
VTA1Q06263 YLR154C-HYLR154C-H 132 nt3.03□□□□□ -1.92
VTA1Q06263 YLR156C-AYLR156C-A 132 nt3.03□□□□□ -1.92
VTA1Q06263 YLR157C-CYLR157C-C 132 nt3.03□□□□□ -1.92
VTA1Q06263 YLR159C-AYLR159C-A 132 nt3.03□□□□□ -1.92
VTA1Q06263 YMR294W-AYMR294W-A 360 nt3.03□□□□□ -1.92
VTA1Q06263 SHG1YBR258C 429 nt3.03□□□□□ -1.92
VTA1Q06263 RCY1YJL204C 2523 nt3.03□□□□□ -1.92
VTA1Q06263 SNT1YCR033W 3681 nt3.03□□□□□ -1.92
VTA1Q06263 BRE5YNR051C 1548 nt3.03□□□□□ -1.92
VTA1Q06263 DSF2YBR007C 2211 nt3.03□□□□□ -1.93
VTA1Q06263 tC(GCA)BtC(GCA)B 72 nt3.02□□□□□ -1.93
VTA1Q06263 tC(GCA)GtC(GCA)G 72 nt3.02□□□□□ -1.93
VTA1Q06263 tC(GCA)P1tC(GCA)P1 72 nt3.02□□□□□ -1.93
VTA1Q06263 tC(GCA)P2tC(GCA)P2 72 nt3.02□□□□□ -1.93
VTA1Q06263 LST7YGR057C 729 nt3.02□□□□□ -1.93
VTA1Q06263 LIN1YHR156C 1023 nt3.02□□□□□ -1.93
VTA1Q06263 RUF5-1RUF5-1 710 nt3.02□□□□□ -1.93
VTA1Q06263 ATP11YNL315C 957 nt3.02□□□□□ -1.93
VTA1Q06263 RUF5-2RUF5-2 710 nt3.02□□□□□ -1.93
VTA1Q06263 TPK2YPL203W 1143 nt3.02□□□□□ -1.93
VTA1Q06263 POL3YDL102W 3294 nt3.02□□□□□ -1.93
VTA1Q06263 GIS4YML006C 2325 nt3.02□□□□□ -1.93
VTA1Q06263 AGE1YDR524C 1449 nt3.02□□□□□ -1.93
VTA1Q06263 FUN30YAL019W 3396 nt3.01□□□□□ -1.93
VTA1Q06263 YGL109WYGL109W 324 nt3.01□□□□□ -1.93
VTA1Q06263 QCR10YHR001W-A 234 nt3.01□□□□□ -1.93
VTA1Q06263 YAL031W-AYAL031W-A 309 nt3.01□□□□□ -1.93
VTA1Q06263 MRPL38YKL170W 417 nt3.01□□□□□ -1.93
VTA1Q06263 GIM5YML094W 492 nt3.01□□□□□ -1.93
VTA1Q06263 ADI1YMR009W 540 nt3.01□□□□□ -1.93
VTA1Q06263 YMR141CYMR141C 309 nt3.01□□□□□ -1.93
VTA1Q06263 YNL203CYNL203C 612 nt3.01□□□□□ -1.93
VTA1Q06263 ATX1YNL259C 222 nt3.01□□□□□ -1.93
VTA1Q06263 BUD21YOR078W 645 nt3.01□□□□□ -1.93
VTA1Q06263 CHS2YBR038W 2892 nt3□□□□□ -1.93
VTA1Q06263 YTA7YGR270W 4140 nt3□□□□□ -1.93
VTA1Q06263 SKO1YNL167C 1944 nt3□□□□□ -1.93
VTA1Q06263 YCR099CYCR099C 468 nt3□□□□□ -1.93
VTA1Q06263 HMO1YDR174W 741 nt3□□□□□ -1.93
VTA1Q06263 tQ(UUG)BtQ(UUG)B 72 nt3□□□□□ -1.93
VTA1Q06263 ATG27YJL178C 816 nt3□□□□□ -1.93
VTA1Q06263 NBP1YLR457C 960 nt3□□□□□ -1.93
VTA1Q06263 CBP6YBR120C 489 nt3□□□□□ -1.93
VTA1Q06263 EAP1YKL204W 1899 nt3□□□□□ -1.93
VTA1Q06263 TOM70YNL121C 1854 nt3□□□□□ -1.93
VTA1Q06263 HOP1YIL072W 1818 nt3□□□□□ -1.93
VTA1Q06263 ERT1YBR239C 1590 nt3□□□□□ -1.93
VTA1Q06263 NSA1YGL111W 1392 nt3□□□□□ -1.93
VTA1Q06263 SLK19YOR195W 2466 nt2.99□□□□□ -1.93
VTA1Q06263 YDR262WYDR262W 819 nt2.99□□□□□ -1.93
VTA1Q06263 DYN2YDR424C 279 nt2.99□□□□□ -1.93
VTA1Q06263 RSM28YDR494W 1086 nt2.99□□□□□ -1.93
VTA1Q06263 TAD1YGL243W 1203 nt2.99□□□□□ -1.93
VTA1Q06263 YJL133C-AYJL133C-A 225 nt2.99□□□□□ -1.93
VTA1Q06263 YLL044WYLL044W 447 nt2.99□□□□□ -1.93
VTA1Q06263 YLR012CYLR012C 300 nt2.99□□□□□ -1.93
VTA1Q06263 YMR316C-AYMR316C-A 312 nt2.99□□□□□ -1.93
VTA1Q06263 YPL142CYPL142C 318 nt2.99□□□□□ -1.93
VTA1Q06263 TIM12YBR091C 330 nt2.99□□□□□ -1.93
VTA1Q06263 SWD3YBR175W 948 nt2.99□□□□□ -1.93
VTA1Q06263 STP2YHR006W 1626 nt2.99□□□□□ -1.93
VTA1Q06263 KHA1YJL094C 2622 nt2.99□□□□□ -1.93
VTA1Q06263 EXO84YBR102C 2262 nt2.99□□□□□ -1.93
VTA1Q06263 YDR034C-DYDR034C-D 5313 nt2.99□□□□□ -1.93
VTA1Q06263 VAS1YGR094W 3315 nt2.98□□□□□ -1.93
VTA1Q06263 SLH1YGR271W 5904 nt2.98□□□□□ -1.93
VTA1Q06263 MSH4YFL003C 2637 nt2.98□□□□□ -1.93
VTA1Q06263 MIX14YDR031W 366 nt2.98□□□□□ -1.93
VTA1Q06263 PGD1YGL025C 1194 nt2.98□□□□□ -1.93
VTA1Q06263 YGL159WYGL159W 1113 nt2.98□□□□□ -1.93
VTA1Q06263 YIL175WYIL175W 318 nt2.98□□□□□ -1.93
VTA1Q06263 RNR2YJL026W 1200 nt2.98□□□□□ -1.93
VTA1Q06263 YJL222W-BYJL222W-B 138 nt2.98□□□□□ -1.93
VTA1Q06263 CSI2YOL007C 1026 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 71.1 ms