Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK3Q00526 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK3Q00526 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CDK3Q00526 AF201337.1-201ENST00000520239 748 ntBASIC20.63■□□□□ 0.89
CDK3Q00526 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.63■□□□□ 0.89
CDK3Q00526 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK3Q00526 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.63■□□□□ 0.89
CDK3Q00526 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK3Q00526 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
CDK3Q00526 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK3Q00526 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK3Q00526 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK3Q00526 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK3Q00526 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK3Q00526 GUSBP6-202ENST00000438529 1198 ntBASIC20.62■□□□□ 0.89
CDK3Q00526 TSPY6P-201ENST00000448518 926 ntBASIC20.62■□□□□ 0.89
CDK3Q00526 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK3Q00526 AL162412.1-201ENST00000567129 965 ntBASIC20.62■□□□□ 0.89
CDK3Q00526 AC105036.2-201ENST00000569468 176 ntBASIC20.62■□□□□ 0.89
CDK3Q00526 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK3Q00526 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.62■□□□□ 0.89
CDK3Q00526 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK3Q00526 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK3Q00526 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK3Q00526 FBXW4P1-201ENST00000426721 2239 ntBASIC20.62■□□□□ 0.89
CDK3Q00526 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK3Q00526 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK3Q00526 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK3Q00526 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK3Q00526 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK3Q00526 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK3Q00526 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK3Q00526 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK3Q00526 AC091799.1-201ENST00000422823 811 ntBASIC20.61■□□□□ 0.89
CDK3Q00526 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK3Q00526 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.61■□□□□ 0.89
CDK3Q00526 AC069236.1-201ENST00000604339 616 ntBASIC20.61■□□□□ 0.89
CDK3Q00526 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
CDK3Q00526 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK3Q00526 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK3Q00526 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK3Q00526 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK3Q00526 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK3Q00526 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK3Q00526 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDK3Q00526 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK3Q00526 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDK3Q00526 AC244015.2-201ENST00000616358 1861 ntBASIC20.6■□□□□ 0.89
CDK3Q00526 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.6■□□□□ 0.89
CDK3Q00526 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDK3Q00526 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDK3Q00526 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK3Q00526 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CDK3Q00526 AL355802.2-201ENST00000402069 882 ntBASIC20.6■□□□□ 0.89
CDK3Q00526 OR10C1-204ENST00000622521 1039 ntBASIC20.6■□□□□ 0.89
CDK3Q00526 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK3Q00526 AC008694.1-202ENST00000636953 945 ntBASIC20.6■□□□□ 0.89
CDK3Q00526 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.6■□□□□ 0.89
CDK3Q00526 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.6■□□□□ 0.89
CDK3Q00526 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDK3Q00526 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDK3Q00526 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDK3Q00526 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK3Q00526 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.6■□□□□ 0.89
CDK3Q00526 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK3Q00526 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK3Q00526 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK3Q00526 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.59■□□□□ 0.89
CDK3Q00526 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK3Q00526 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK3Q00526 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK3Q00526 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDK3Q00526 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK3Q00526 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK3Q00526 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CDK3Q00526 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK3Q00526 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK3Q00526 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CDK3Q00526 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK3Q00526 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.59■□□□□ 0.89
CDK3Q00526 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK3Q00526 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.58■□□□□ 0.89
CDK3Q00526 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.58■□□□□ 0.89
CDK3Q00526 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK3Q00526 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK3Q00526 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CDK3Q00526 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDK3Q00526 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.58■□□□□ 0.89
CDK3Q00526 AC016405.3-201ENST00000607710 860 ntBASIC20.58■□□□□ 0.89
CDK3Q00526 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK3Q00526 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.58■□□□□ 0.88
CDK3Q00526 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDK3Q00526 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CDK3Q00526 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK3Q00526 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK3Q00526 SLC29A4P1-201ENST00000398760 971 ntBASIC20.57■□□□□ 0.88
CDK3Q00526 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK3Q00526 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK3Q00526 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.57■□□□□ 0.88
CDK3Q00526 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms