Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRPXP78539 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRPXP78539 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRPXP78539 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRPXP78539 PLK5-205ENST00000642079 1969 ntBASIC17.2■□□□□ 0.34
SRPXP78539 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRPXP78539 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRPXP78539 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRPXP78539 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.2■□□□□ 0.34
SRPXP78539 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.2■□□□□ 0.34
SRPXP78539 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SRPXP78539 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.19■□□□□ 0.34
SRPXP78539 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
SRPXP78539 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SRPXP78539 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRPXP78539 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPXP78539 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPXP78539 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SRPXP78539 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.19■□□□□ 0.34
SRPXP78539 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPXP78539 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPXP78539 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPXP78539 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.19■□□□□ 0.34
SRPXP78539 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPXP78539 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPXP78539 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.19■□□□□ 0.34
SRPXP78539 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPXP78539 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPXP78539 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.19■□□□□ 0.34
SRPXP78539 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRPXP78539 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.19■□□□□ 0.34
SRPXP78539 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPXP78539 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRPXP78539 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRPXP78539 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPXP78539 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRPXP78539 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPXP78539 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.18■□□□□ 0.34
SRPXP78539 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRPXP78539 AC006455.2-201ENST00000429931 906 ntBASIC17.18■□□□□ 0.34
SRPXP78539 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SRPXP78539 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SRPXP78539 AC121338.2-201ENST00000622535 1744 ntBASIC17.18■□□□□ 0.34
SRPXP78539 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SRPXP78539 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.17■□□□□ 0.34
SRPXP78539 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPXP78539 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SRPXP78539 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPXP78539 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
SRPXP78539 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPXP78539 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.17■□□□□ 0.34
SRPXP78539 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SRPXP78539 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SRPXP78539 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPXP78539 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.17■□□□□ 0.34
SRPXP78539 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.17■□□□□ 0.34
SRPXP78539 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SRPXP78539 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.17■□□□□ 0.34
SRPXP78539 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SRPXP78539 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SRPXP78539 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.17■□□□□ 0.34
SRPXP78539 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPXP78539 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRPXP78539 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.17■□□□□ 0.34
SRPXP78539 AC020907.5-201ENST00000624372 1936 ntBASIC17.17■□□□□ 0.34
SRPXP78539 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.17■□□□□ 0.34
SRPXP78539 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPXP78539 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRPXP78539 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.16■□□□□ 0.34
SRPXP78539 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPXP78539 AP006587.3-201ENST00000525742 1516 ntBASIC17.16■□□□□ 0.34
SRPXP78539 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SRPXP78539 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.16■□□□□ 0.34
SRPXP78539 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPXP78539 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.16■□□□□ 0.34
SRPXP78539 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.16■□□□□ 0.34
SRPXP78539 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SRPXP78539 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SRPXP78539 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPXP78539 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SRPXP78539 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPXP78539 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPXP78539 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.16■□□□□ 0.34
SRPXP78539 MIR6724-1-201ENST00000616420 92 ntBASIC17.16■□□□□ 0.34
SRPXP78539 MIR6724-2-201ENST00000616483 92 ntBASIC17.16■□□□□ 0.34
SRPXP78539 MIR6724-4-201ENST00000617390 92 ntBASIC17.16■□□□□ 0.34
SRPXP78539 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.16■□□□□ 0.34
SRPXP78539 MIR6724-3-201ENST00000622482 92 ntBASIC17.16■□□□□ 0.34
SRPXP78539 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SRPXP78539 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPXP78539 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPXP78539 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRPXP78539 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.16■□□□□ 0.34
SRPXP78539 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.15■□□□□ 0.34
SRPXP78539 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPXP78539 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPXP78539 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPXP78539 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SRPXP78539 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPXP78539 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms