Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.11■□□□□ 0.97
AP1S1P61966 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP1S1P61966 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP1S1P61966 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.11■□□□□ 0.97
AP1S1P61966 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.11■□□□□ 0.97
AP1S1P61966 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP1S1P61966 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.11■□□□□ 0.97
AP1S1P61966 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.11■□□□□ 0.97
AP1S1P61966 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP1S1P61966 RBM17P2-201ENST00000616397 1405 ntBASIC21.11■□□□□ 0.97
AP1S1P61966 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.11■□□□□ 0.97
AP1S1P61966 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP1S1P61966 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
AP1S1P61966 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
AP1S1P61966 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
AP1S1P61966 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP1S1P61966 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.1■□□□□ 0.97
AP1S1P61966 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP1S1P61966 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP1S1P61966 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.1■□□□□ 0.97
AP1S1P61966 DUX4L16-201ENST00000555130 1264 ntBASIC21.1■□□□□ 0.97
AP1S1P61966 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.1■□□□□ 0.97
AP1S1P61966 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
AP1S1P61966 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
AP1S1P61966 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
AP1S1P61966 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.1■□□□□ 0.97
AP1S1P61966 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP1S1P61966 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP1S1P61966 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP1S1P61966 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.1■□□□□ 0.97
AP1S1P61966 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP1S1P61966 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
AP1S1P61966 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP1S1P61966 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP1S1P61966 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
AP1S1P61966 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.09■□□□□ 0.97
AP1S1P61966 TERF1P5-201ENST00000477545 1207 ntBASIC21.09■□□□□ 0.97
AP1S1P61966 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
AP1S1P61966 AC013268.1-206ENST00000638368 961 ntBASIC21.09■□□□□ 0.97
AP1S1P61966 AC112229.1-201ENST00000639295 961 ntBASIC21.09■□□□□ 0.97
AP1S1P61966 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.09■□□□□ 0.97
AP1S1P61966 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.09■□□□□ 0.97
AP1S1P61966 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP1S1P61966 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP1S1P61966 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP1S1P61966 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP1S1P61966 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP1S1P61966 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP1S1P61966 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP1S1P61966 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP1S1P61966 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.08■□□□□ 0.97
AP1S1P61966 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.08■□□□□ 0.97
AP1S1P61966 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP1S1P61966 AC073111.5-205ENST00000641717 521 ntBASIC21.08■□□□□ 0.97
AP1S1P61966 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP1S1P61966 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP1S1P61966 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP1S1P61966 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP1S1P61966 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP1S1P61966 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
AP1S1P61966 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP1S1P61966 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP1S1P61966 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.07■□□□□ 0.96
AP1S1P61966 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP1S1P61966 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.07■□□□□ 0.96
AP1S1P61966 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP1S1P61966 AC231657.2-201ENST00000624556 255 ntBASIC21.07■□□□□ 0.96
AP1S1P61966 RARRES2P11-201ENST00000635158 484 ntBASIC21.07■□□□□ 0.96
AP1S1P61966 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP1S1P61966 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP1S1P61966 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.06■□□□□ 0.96
AP1S1P61966 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP1S1P61966 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP1S1P61966 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
AP1S1P61966 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AP1S1P61966 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.06■□□□□ 0.96
AP1S1P61966 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AP1S1P61966 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.06■□□□□ 0.96
AP1S1P61966 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.06■□□□□ 0.96
AP1S1P61966 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.06■□□□□ 0.96
AP1S1P61966 AC007322.4-201ENST00000509611 723 ntBASIC21.06■□□□□ 0.96
AP1S1P61966 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.06■□□□□ 0.96
AP1S1P61966 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.06■□□□□ 0.96
AP1S1P61966 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP1S1P61966 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP1S1P61966 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP1S1P61966 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.06■□□□□ 0.96
AP1S1P61966 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP1S1P61966 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP1S1P61966 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
AP1S1P61966 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP1S1P61966 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.05■□□□□ 0.96
AP1S1P61966 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.05■□□□□ 0.96
AP1S1P61966 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.05■□□□□ 0.96
AP1S1P61966 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
AP1S1P61966 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.05■□□□□ 0.96
AP1S1P61966 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP1S1P61966 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP1S1P61966 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S1P61966 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms