Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.93■□□□□ 0.3
SPCS3P61009 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.93■□□□□ 0.3
SPCS3P61009 DUX4L19-201ENST00000557448 1267 ntBASIC16.93■□□□□ 0.3
SPCS3P61009 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.93■□□□□ 0.3
SPCS3P61009 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS3P61009 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS3P61009 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SPCS3P61009 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS3P61009 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SPCS3P61009 FEM1AP1-201ENST00000431297 1995 ntBASIC16.93■□□□□ 0.3
SPCS3P61009 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.93■□□□□ 0.3
SPCS3P61009 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS3P61009 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS3P61009 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPCS3P61009 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.93■□□□□ 0.3
SPCS3P61009 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.92■□□□□ 0.3
SPCS3P61009 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.92■□□□□ 0.3
SPCS3P61009 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SPCS3P61009 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.92■□□□□ 0.3
SPCS3P61009 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SPCS3P61009 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 LINC01006-201ENST00000333319 2292 ntBASIC16.92■□□□□ 0.3
SPCS3P61009 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SPCS3P61009 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 SYT6-210ENST00000641643 1587 ntBASIC16.92■□□□□ 0.3
SPCS3P61009 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.92■□□□□ 0.3
SPCS3P61009 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.92■□□□□ 0.3
SPCS3P61009 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPCS3P61009 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS3P61009 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS3P61009 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS3P61009 AP006587.3-201ENST00000525742 1516 ntBASIC16.91■□□□□ 0.3
SPCS3P61009 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS3P61009 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS3P61009 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS3P61009 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.91■□□□□ 0.3
SPCS3P61009 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SPCS3P61009 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.91■□□□□ 0.3
SPCS3P61009 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SPCS3P61009 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SPCS3P61009 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.91■□□□□ 0.3
SPCS3P61009 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPCS3P61009 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS3P61009 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS3P61009 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS3P61009 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS3P61009 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS3P61009 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS3P61009 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS3P61009 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.9■□□□□ 0.3
SPCS3P61009 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SPCS3P61009 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS3P61009 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SPCS3P61009 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.9■□□□□ 0.3
SPCS3P61009 AL512631.2-201ENST00000604634 923 ntBASIC16.9■□□□□ 0.3
SPCS3P61009 AC136469.2-201ENST00000623944 1028 ntBASIC16.9■□□□□ 0.3
SPCS3P61009 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS3P61009 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SPCS3P61009 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SPCS3P61009 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPCS3P61009 AL020996.1-203ENST00000536896 2307 ntBASIC16.9■□□□□ 0.3
SPCS3P61009 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.9■□□□□ 0.3
SPCS3P61009 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
SPCS3P61009 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SPCS3P61009 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.89■□□□□ 0.3
SPCS3P61009 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.89■□□□□ 0.3
SPCS3P61009 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
SPCS3P61009 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SPCS3P61009 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.89■□□□□ 0.29
SPCS3P61009 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.89■□□□□ 0.29
SPCS3P61009 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SPCS3P61009 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.89■□□□□ 0.29
SPCS3P61009 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SPCS3P61009 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.89■□□□□ 0.29
SPCS3P61009 SERBP1P1-201ENST00000396021 1160 ntBASIC16.89■□□□□ 0.29
SPCS3P61009 GUSBP5-201ENST00000418136 578 ntBASIC16.89■□□□□ 0.29
SPCS3P61009 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
SPCS3P61009 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms