Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC092437.1-201ENST00000624794 1048 ntBASIC19.13■□□□□ 0.65
CLDN20P56880 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CLDN20P56880 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN20P56880 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN20P56880 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN20P56880 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN20P56880 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CLDN20P56880 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN20P56880 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN20P56880 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN20P56880 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN20P56880 AC010542.4-201ENST00000563151 1910 ntBASIC19.12■□□□□ 0.65
CLDN20P56880 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN20P56880 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN20P56880 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
CLDN20P56880 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
CLDN20P56880 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN20P56880 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN20P56880 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN20P56880 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN20P56880 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.12■□□□□ 0.65
CLDN20P56880 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN20P56880 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN20P56880 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN20P56880 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN20P56880 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN20P56880 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLDN20P56880 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CLDN20P56880 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN20P56880 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN20P56880 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN20P56880 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN20P56880 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN20P56880 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN20P56880 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN20P56880 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN20P56880 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN20P56880 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN20P56880 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLDN20P56880 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN20P56880 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN20P56880 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN20P56880 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.1■□□□□ 0.65
CLDN20P56880 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN20P56880 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.1■□□□□ 0.65
CLDN20P56880 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN20P56880 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
CLDN20P56880 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLDN20P56880 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CLDN20P56880 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN20P56880 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN20P56880 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN20P56880 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN20P56880 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN20P56880 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN20P56880 AC137761.2-201ENST00000561729 223 ntBASIC19.1■□□□□ 0.65
CLDN20P56880 AC145350.3-201ENST00000569033 163 ntBASIC19.1■□□□□ 0.65
CLDN20P56880 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN20P56880 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN20P56880 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN20P56880 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN20P56880 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLDN20P56880 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN20P56880 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CLDN20P56880 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.09■□□□□ 0.65
CLDN20P56880 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN20P56880 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN20P56880 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN20P56880 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN20P56880 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.08■□□□□ 0.65
CLDN20P56880 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN20P56880 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN20P56880 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN20P56880 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN20P56880 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN20P56880 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN20P56880 EEF1DP3-203ENST00000566025 782 ntBASIC19.08■□□□□ 0.64
CLDN20P56880 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN20P56880 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.08■□□□□ 0.64
CLDN20P56880 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN20P56880 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN20P56880 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN20P56880 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.08■□□□□ 0.64
CLDN20P56880 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN20P56880 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN20P56880 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms