Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.82■□□□□ 0.76
SH3BGRP55822 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3BGRP55822 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SH3BGRP55822 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3BGRP55822 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SH3BGRP55822 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.82■□□□□ 0.76
SH3BGRP55822 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3BGRP55822 AC090340.1-201ENST00000620778 4980 ntBASIC19.82■□□□□ 0.76
SH3BGRP55822 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3BGRP55822 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3BGRP55822 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3BGRP55822 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3BGRP55822 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH3BGRP55822 AC009102.2-201ENST00000606772 1639 ntBASIC19.81■□□□□ 0.76
SH3BGRP55822 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3BGRP55822 AC131281.2-201ENST00000520478 145 ntBASIC19.81■□□□□ 0.76
SH3BGRP55822 AL512631.2-201ENST00000604634 923 ntBASIC19.81■□□□□ 0.76
SH3BGRP55822 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH3BGRP55822 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH3BGRP55822 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.81■□□□□ 0.76
SH3BGRP55822 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SH3BGRP55822 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.81■□□□□ 0.76
SH3BGRP55822 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SH3BGRP55822 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SH3BGRP55822 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3BGRP55822 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3BGRP55822 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3BGRP55822 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH3BGRP55822 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.8■□□□□ 0.76
SH3BGRP55822 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SH3BGRP55822 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3BGRP55822 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3BGRP55822 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH3BGRP55822 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3BGRP55822 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.8■□□□□ 0.76
SH3BGRP55822 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3BGRP55822 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH3BGRP55822 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH3BGRP55822 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.8■□□□□ 0.76
SH3BGRP55822 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SH3BGRP55822 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SH3BGRP55822 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3BGRP55822 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3BGRP55822 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3BGRP55822 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3BGRP55822 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3BGRP55822 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3BGRP55822 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3BGRP55822 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3BGRP55822 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.79■□□□□ 0.76
SH3BGRP55822 SRD5A1P1-201ENST00000442297 786 ntBASIC19.79■□□□□ 0.76
SH3BGRP55822 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3BGRP55822 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SH3BGRP55822 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.79■□□□□ 0.76
SH3BGRP55822 HCG11-201ENST00000411553 5696 ntBASIC19.79■□□□□ 0.76
SH3BGRP55822 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
SH3BGRP55822 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
SH3BGRP55822 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 C17orf82-201ENST00000623772 1530 ntBASIC19.78■□□□□ 0.76
SH3BGRP55822 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.78■□□□□ 0.76
SH3BGRP55822 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SH3BGRP55822 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SH3BGRP55822 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.78■□□□□ 0.76
SH3BGRP55822 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.78■□□□□ 0.76
SH3BGRP55822 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.78■□□□□ 0.76
SH3BGRP55822 AC008406.3-201ENST00000620001 1374 ntBASIC19.78■□□□□ 0.76
SH3BGRP55822 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3BGRP55822 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3BGRP55822 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.77■□□□□ 0.76
SH3BGRP55822 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.77■□□□□ 0.76
SH3BGRP55822 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3BGRP55822 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3BGRP55822 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3BGRP55822 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3BGRP55822 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3BGRP55822 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3BGRP55822 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.77■□□□□ 0.76
SH3BGRP55822 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.77■□□□□ 0.76
SH3BGRP55822 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.77■□□□□ 0.76
SH3BGRP55822 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3BGRP55822 GABARAPL3-202ENST00000624044 1851 ntBASIC19.77■□□□□ 0.76
SH3BGRP55822 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3BGRP55822 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SH3BGRP55822 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SH3BGRP55822 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.77■□□□□ 0.75
SH3BGRP55822 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.76■□□□□ 0.75
SH3BGRP55822 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SH3BGRP55822 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3BGRP55822 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms