Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDH12P55289 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH12P55289 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDH12P55289 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CDH12P55289 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH12P55289 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 AC008764.7-201ENST00000593779 1081 ntBASIC19.42■□□□□ 0.7
CDH12P55289 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH12P55289 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH12P55289 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CDH12P55289 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH12P55289 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH12P55289 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CDH12P55289 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH12P55289 AP006587.3-201ENST00000525742 1516 ntBASIC19.41■□□□□ 0.7
CDH12P55289 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDH12P55289 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH12P55289 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH12P55289 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH12P55289 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH12P55289 PBX2P1-201ENST00000493219 1291 ntBASIC19.41■□□□□ 0.7
CDH12P55289 IGHV3-19-201ENST00000521488 291 ntBASIC19.41■□□□□ 0.7
CDH12P55289 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH12P55289 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.41■□□□□ 0.7
CDH12P55289 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.41■□□□□ 0.7
CDH12P55289 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH12P55289 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH12P55289 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDH12P55289 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDH12P55289 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH12P55289 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH12P55289 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH12P55289 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH12P55289 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH12P55289 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH12P55289 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH12P55289 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH12P55289 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH12P55289 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDH12P55289 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDH12P55289 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDH12P55289 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH12P55289 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH12P55289 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH12P55289 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.4■□□□□ 0.7
CDH12P55289 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH12P55289 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH12P55289 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH12P55289 AC006128.1-201ENST00000624704 1661 ntBASIC19.4■□□□□ 0.7
CDH12P55289 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.39■□□□□ 0.7
CDH12P55289 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH12P55289 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
CDH12P55289 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH12P55289 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH12P55289 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDH12P55289 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH12P55289 AC099791.1-201ENST00000416440 715 ntBASIC19.39■□□□□ 0.69
CDH12P55289 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH12P55289 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH12P55289 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH12P55289 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH12P55289 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CDH12P55289 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH12P55289 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH12P55289 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH12P55289 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH12P55289 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH12P55289 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH12P55289 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDH12P55289 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH12P55289 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH12P55289 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms