Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDX1P52945 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDX1P52945 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDX1P52945 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDX1P52945 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDX1P52945 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PDX1P52945 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.3■□□□□ 0.84
PDX1P52945 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDX1P52945 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.3■□□□□ 0.84
PDX1P52945 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.3■□□□□ 0.84
PDX1P52945 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.3■□□□□ 0.84
PDX1P52945 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.3■□□□□ 0.84
PDX1P52945 AC069236.1-201ENST00000604339 616 ntBASIC20.3■□□□□ 0.84
PDX1P52945 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PDX1P52945 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PDX1P52945 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDX1P52945 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDX1P52945 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDX1P52945 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDX1P52945 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.3■□□□□ 0.84
PDX1P52945 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDX1P52945 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDX1P52945 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.29■□□□□ 0.84
PDX1P52945 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.29■□□□□ 0.84
PDX1P52945 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDX1P52945 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.29■□□□□ 0.84
PDX1P52945 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDX1P52945 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDX1P52945 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDX1P52945 PRORSD1P-201ENST00000295112 541 ntBASIC20.29■□□□□ 0.84
PDX1P52945 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDX1P52945 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.29■□□□□ 0.84
PDX1P52945 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDX1P52945 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.29■□□□□ 0.84
PDX1P52945 AC093827.2-201ENST00000512654 315 ntBASIC20.29■□□□□ 0.84
PDX1P52945 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.29■□□□□ 0.84
PDX1P52945 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
PDX1P52945 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.29■□□□□ 0.84
PDX1P52945 AC008694.1-202ENST00000636953 945 ntBASIC20.29■□□□□ 0.84
PDX1P52945 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDX1P52945 AC092053.2-201ENST00000640557 1818 ntBASIC20.29■□□□□ 0.84
PDX1P52945 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PDX1P52945 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDX1P52945 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PDX1P52945 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDX1P52945 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.28■□□□□ 0.84
PDX1P52945 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDX1P52945 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDX1P52945 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDX1P52945 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.28■□□□□ 0.84
PDX1P52945 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.28■□□□□ 0.84
PDX1P52945 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.28■□□□□ 0.84
PDX1P52945 AC008175.2-201ENST00000612840 297 ntBASIC20.28■□□□□ 0.84
PDX1P52945 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.28■□□□□ 0.84
PDX1P52945 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PDX1P52945 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.28■□□□□ 0.84
PDX1P52945 MYC-209ENST00000641252 345 ntBASIC20.28■□□□□ 0.84
PDX1P52945 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDX1P52945 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDX1P52945 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDX1P52945 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.28■□□□□ 0.84
PDX1P52945 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDX1P52945 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDX1P52945 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
PDX1P52945 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDX1P52945 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDX1P52945 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
PDX1P52945 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDX1P52945 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDX1P52945 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.27■□□□□ 0.84
PDX1P52945 BX276092.2-201ENST00000417668 665 ntBASIC20.27■□□□□ 0.84
PDX1P52945 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.27■□□□□ 0.84
PDX1P52945 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.27■□□□□ 0.84
PDX1P52945 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.27■□□□□ 0.84
PDX1P52945 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.27■□□□□ 0.84
PDX1P52945 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDX1P52945 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDX1P52945 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDX1P52945 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PDX1P52945 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
PDX1P52945 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PDX1P52945 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDX1P52945 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDX1P52945 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDX1P52945 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDX1P52945 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
PDX1P52945 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.26■□□□□ 0.83
PDX1P52945 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDX1P52945 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDX1P52945 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDX1P52945 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDX1P52945 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDX1P52945 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.26■□□□□ 0.83
PDX1P52945 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDX1P52945 RARRES2P4-201ENST00000514074 484 ntBASIC20.26■□□□□ 0.83
PDX1P52945 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.26■□□□□ 0.83
PDX1P52945 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PDX1P52945 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDX1P52945 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
PDX1P52945 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms